RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 GRAP2O75791 330 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 GRIA2P42262 883 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 PER3P56645 1201 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 BOP1Q14137 746 aaKnown RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 ATP13A5Q4VNC0 1218 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 DOK6Q6PKX4 331 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 PRUNE1Q86TP1 453 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 KLHL23Q8NBE8 558 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 ZFP28Q8NHY6 868 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 ING5Q8WYH8 240 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 MCEEQ96PE7 176 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 MLPHQ9BV36 600 aaPredicted RBP9.68□□□□□ -0.86
SCAF11-205ENST00000465950 KLHL28Q9NXS3 571 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 TSPAN16Q9UKR8 245 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 VAV3Q9UKW4 847 aa9.68□□□□□ -0.86
SCAF11-205ENST00000465950 GSAPA4D1B5 854 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SYNDIG1LA6NDD5 238 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SLC38A8A6NNN8 435 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 CFLARO15519 480 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 TGM2P21980 687 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 PBLDP30039 288 aaPredicted RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 PEX5P50542 639 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 EIF3BP55884 814 aaKnown RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SLC6A3Q01959 620 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 MORN1Q5T089 497 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 PDSS1Q5T2R2 415 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 GPR152Q8TDT2 470 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 TTYH3Q9C0H2 523 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 TRABDQ9H4I3 376 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 LRRC37A3O60309 1634 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 HNRNPCL2B2RXH8 293 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 XPO1O14980 1071 aaKnown RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 HNRNPCL1O60812 293 aaKnown RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 PYGBP11216 843 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 ATP6V1C1P21283 382 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 MMP13P45452 471 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 AVPR1BP47901 424 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 RPL6Q02878 288 aaKnown RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 C1QBPQ07021 282 aaKnown RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 TOMM20Q15388 145 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 CNGA2Q16280 664 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 LYSMD4Q5XG99 296 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SEC14L1Q92503 715 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 RAB7BQ96AH8 199 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 ZNF333Q96JL9 665 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 DUSP23Q9BVJ7 150 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 XPO4Q9C0E2 1151 aaKnown RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 RAD21L1Q9H4I0 556 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 ERI2A8K979 691 aaKnown RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 PSTPIP1O43586 416 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 DCXO43602 365 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 CREB5Q02930 508 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 IFT88Q13099 833 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 PARP15Q460N3 678 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 FAAH2Q6GMR7 532 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 GDF6Q6KF10 455 aaPredicted RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 AIFM3Q96NN9 605 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SERPINI1Q99574 410 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SUCOQ9UBS9 1254 aaKnown RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 PCDHA13Q9Y5I0 950 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 BACE2Q9Y5Z0 518 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 A0A1B0GVM2 712 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 FAM221BA6H8Z2 402 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 TCAF2A6NFQ2 919 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 ARL5CA6NH57 179 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 ENPP3O14638 875 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 KIAA0355O15063 1070 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 PSMD10O75832 226 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 GPC1P35052 558 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 HSD17B2P37059 387 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 CDH4P55283 916 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 AP1S1P61966 158 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 MCL1Q07820 350 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 KIF19Q2TAC6 998 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SLC25A41Q8N5S1 370 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 IL22RA1Q8N6P7 574 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 ZNF461Q8TAF7 563 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SYN2Q92777 582 aaPredicted RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 CSPG4P5Q96PW8 444 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SH2D3AQ9BRG2 576 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 RUSC1Q9BVN2 902 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 PHF7Q9BWX1 381 aaPredicted RBP9.67□□□□□ -0.86
SCAF11-205ENST00000465950 EPB41L5Q9HCM4 733 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 CA14Q9ULX7 337 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 SORCS3Q9UPU3 1222 aa9.67□□□□□ -0.86
SCAF11-205ENST00000465950 FAM170AA1A519 330 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 FAM187AA6NFU0 413 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 CLDN4O14493 209 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 FESP07332 822 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 RPL3P39023 403 aaKnown RBP9.66□□□□□ -0.86
SCAF11-205ENST00000465950 INHBCP55103 352 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 C9orf57Q5W0N0 161 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 SLC9B2Q86UD5 537 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 FAM35AQ86V20 835 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 SERINC5Q86VE9 423 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 RAB43Q86YS6 212 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 ULBP1Q9BZM6 244 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 OGDHLQ9ULD0 1010 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 SIT1Q9Y3P8 196 aa9.66□□□□□ -0.86
SCAF11-205ENST00000465950 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms