RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TPCN2Q8NHX9 752 aa12.17□□□□□ -0.46
CPNE1-221ENST00000462352 EXOC4Q96A65 974 aa12.17□□□□□ -0.46
CPNE1-221ENST00000462352 PNKPQ96T60 521 aa12.17□□□□□ -0.46
CPNE1-221ENST00000462352 SLC2A11Q9BYW1 496 aa12.17□□□□□ -0.46
CPNE1-221ENST00000462352 FOXQ1Q9C009 403 aa12.17□□□□□ -0.46
CPNE1-221ENST00000462352 MFSD1Q9H3U5 465 aa12.17□□□□□ -0.46
CPNE1-221ENST00000462352 DHX35Q9H5Z1 703 aaKnown RBP12.17□□□□□ -0.46
CPNE1-221ENST00000462352 ZWILCHQ9H900 591 aa12.17□□□□□ -0.46
CPNE1-221ENST00000462352 DNAJC17Q9NVM6 304 aaKnown RBP12.17□□□□□ -0.46
CPNE1-221ENST00000462352 DEC1Q9P2X7 70 aa12.17□□□□□ -0.46
CPNE1-221ENST00000462352 TRIM10Q9UDY6 481 aa12.17□□□□□ -0.46
CPNE1-221ENST00000462352 NDRG2Q9UN36 371 aaKnown RBP12.17□□□□□ -0.46
CPNE1-221ENST00000462352 MRPS17Q9Y2R5 130 aaKnown RBP12.17□□□□□ -0.46
CPNE1-221ENST00000462352 A0A1B0GVM2 712 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 TCAF2A6NFQ2 919 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 STK25O00506 426 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 CNTN5O94779 1100 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 LRIG2O94898 1065 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 LUC7L3O95232 432 aaKnown RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 KAT7O95251 611 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 RARAP10276 462 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 TARSP26639 723 aaKnown RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 L1CAMP32004 1257 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 SLC1A1P43005 524 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 NAP1L1P55209 391 aaKnown RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 TAS2R40P59535 323 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 GRSF1Q12849 480 aaKnown RBP eCLIP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 SEMA3BQ13214 749 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 UBXN2BQ14CS0 331 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 ALFQ53S48 1182 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 GRAMD4Q6IC98 578 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 FSTL4Q6MZW2 842 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 C11orf63Q6NUN7 778 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 CHST9Q7L1S5 443 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 PSTKQ8IV42 348 aaKnown RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 MFN1Q8IWA4 741 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 SUGP1Q8IWZ8 645 aaKnown RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 CCAR2Q8N163 923 aaKnown RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 WFDC5Q8TCV5 224 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 TEKT4Q8WW24 435 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 CALR3Q96L12 384 aaKnown RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 KCTD15Q96SI1 283 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 NELL2Q99435 816 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 ZYG11BQ9C0D3 744 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 GOLPH3Q9H4A6 298 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 ARHGEF4Q9NR80 690 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 MPP6Q9NZW5 540 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 PPARGC1AQ9UBK2 798 aaKnown RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 NEU3Q9UQ49 428 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 SLC27A6Q9Y2P4 619 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 MTF2Q9Y483 593 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-221ENST00000462352 HYOU1Q9Y4L1 999 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 ALG6Q9Y672 507 aa12.16□□□□□ -0.46
CPNE1-221ENST00000462352 MACROD2A1Z1Q3 448 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 FAM170BA6NMN3 283 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 H0Y626 953 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 KRT86O43790 486 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 CREB3O43889 395 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 CLDN11O75508 207 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 EGFP01133 1207 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 APODP05090 189 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 DRD1P21728 446 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 COMTP21964 271 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 HLA-FP30511 346 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 HOXC13P31276 330 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 GJC1P36383 396 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 GRIA2P42262 883 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 CDH4P55283 916 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 CDH18Q13634 790 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 CCINQ13939 588 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 DPYSL2Q16555 572 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 PREPLQ4J6C6 727 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-221ENST00000462352 ATP13A4Q4VNC1 1196 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 FSCBQ5H9T9 825 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 CWF19L1Q69YN2 538 aaKnown RBP12.15□□□□□ -0.46
CPNE1-221ENST00000462352 RWDD4Q6NW29 188 aaKnown RBP12.15□□□□□ -0.46
CPNE1-221ENST00000462352 DAAM2Q86T65 1068 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 CCDC117Q8IWD4 279 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-221ENST00000462352 ZNF557Q8N988 423 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-221ENST00000462352 TERB1Q8NA31 727 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 PJA1Q8NG27 643 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 FIBINQ8TAL6 211 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 HSPH1Q92598 858 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 EZH1Q92800 747 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-221ENST00000462352 PBXIP1Q96AQ6 731 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 TBC1D31Q96DN5 1066 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 EPAS1Q99814 870 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 OSBPL6Q9BZF3 934 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 TSGA10Q9BZW7 698 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.15□□□□□ -0.46
CPNE1-221ENST00000462352 ABCB8Q9NUT2 735 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 PPP2R2CQ9Y2T4 447 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 KIAA1549LQ6ZVL6 1849 aa12.15□□□□□ -0.46
CPNE1-221ENST00000462352 A0A0A0MRY4 1105 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-221ENST00000462352 TBC1D3BA6NDS4 549 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 K7EQS6 105 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 EEF2KO00418 725 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms