RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 DFNA5O60443 496 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 ACSL4O60488 711 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 TBL1XO60907 577 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 SMC2O95347 1197 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 CD70P32970 193 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 PPP1R2P41236 205 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 FMO5P49326 533 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 SGSHP51688 502 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
USP1-204ENST00000452143 TBX4P57082 545 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 ST8SIA6P61647 398 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 CETN1Q12798 172 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 STIM1Q13586 685 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 ARID5BQ14865 1188 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 ANKRD40Q6AI12 368 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 PMF1Q6P1K2 205 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 TMPRSS7Q7RTY8 843 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 GALNT15Q8N3T1 639 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 FIBINQ8TAL6 211 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 RHBDD1Q8TEB9 315 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 HSFY1Q96LI6 401 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 PRICKLE1Q96MT3 831 aaPredicted RBP11.31□□□□□ -0.6
USP1-204ENST00000452143 SERPINB11Q96P15 392 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 NT5C1BQ96P26 610 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 TRIM62Q9BVG3 475 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 HOOK1Q9UJC3 728 aaKnown RBP11.31□□□□□ -0.6
USP1-204ENST00000452143 ANKRD6Q9Y2G4 727 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 GPSM3Q9Y4H4 160 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 SLCO1B1Q9Y6L6 691 aa11.31□□□□□ -0.6
USP1-204ENST00000452143 P4HA2O15460 535 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 TNFSF14O43557 240 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 RNASEH1O60930 286 aaKnown RBP11.3□□□□□ -0.6
USP1-204ENST00000452143 SLC6A4P31645 630 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 RGS7P49802 495 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 RACK1P63244 317 aaKnown RBP11.3□□□□□ -0.6
USP1-204ENST00000452143 LRMPQ12912 555 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 CDH18Q13634 790 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 CNGA2Q16280 664 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 MEA1Q16626 185 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 HNRNPA1L2Q32P51 320 aaKnown RBP11.3□□□□□ -0.6
USP1-204ENST00000452143 RFWD3Q6PCD5 774 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 BEND5Q7L4P6 421 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 ADAT2Q7Z6V5 191 aaKnown RBP11.3□□□□□ -0.6
USP1-204ENST00000452143 CCDC117Q8IWD4 279 aaPredicted RBP11.3□□□□□ -0.6
USP1-204ENST00000452143 PPM1KQ8N3J5 372 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 WFDC5Q8TCV5 224 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 TFAP2BQ92481 460 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 TTC17Q96AE7 1141 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 MYO19Q96H55 970 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 LMLNQ96KR4 655 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 CEP63Q96MT8 703 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 PABPC3Q9H361 631 aaKnown RBP11.3□□□□□ -0.6
USP1-204ENST00000452143 FZD4Q9ULV1 537 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 TPX2Q9ULW0 747 aaKnown RBP11.3□□□□□ -0.6
USP1-204ENST00000452143 NCKAP1Q9Y2A7 1128 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 TLR6Q9Y2C9 796 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 PCDHB4Q9Y5E5 795 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 SNX11Q9Y5W9 270 aa11.3□□□□□ -0.6
USP1-204ENST00000452143 TRIM49BA6NDI0 452 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 GOLGA6L4A6NEF3 574 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 LRRC72A6NJI9 287 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 VILLO15195 856 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 FSBPO95073 299 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 IGHV4-34P06331 123 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 SRPRAP08240 638 aaKnown RBP11.29□□□□□ -0.6
USP1-204ENST00000452143 ATXN1LP0C7T5 689 aaKnown RBP11.29□□□□□ -0.6
USP1-204ENST00000452143 CSKP41240 450 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 CTSKP43235 329 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 GCNT1Q02742 428 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 COL9A2Q14055 689 aaPredicted RBP11.29□□□□□ -0.6
USP1-204ENST00000452143 ACAP1Q15027 740 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 CST6Q15828 149 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 KIAA0895LQ68EN5 471 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 NADSYN1Q6IA69 706 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 FOXR2Q6PJQ5 311 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 DQX1Q8TE96 717 aaKnown RBP11.29□□□□□ -0.6
USP1-204ENST00000452143 SMARCE1Q969G3 411 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 SKA1Q96BD8 255 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 DHTKD1Q96HY7 919 aaPredicted RBP11.29□□□□□ -0.6
USP1-204ENST00000452143 FCRL2Q96LA5 508 aaPredicted RBP11.29□□□□□ -0.6
USP1-204ENST00000452143 ZSWIM1Q9BR11 485 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 ORAI3Q9BRQ5 295 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 ACE2Q9BYF1 805 aaPredicted RBP11.29□□□□□ -0.6
USP1-204ENST00000452143 GDPD2Q9HCC8 539 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 ADAMTS1Q9UHI8 967 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 BTBD3Q9Y2F9 522 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 ITIH6Q6UXX5 1313 aa11.29□□□□□ -0.6
USP1-204ENST00000452143 KNTC1P50748 2209 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 URB1O60287 2271 aaKnown RBP11.28□□□□□ -0.6
USP1-204ENST00000452143 GOLGA6L7A0A1B0GV03 622 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 A0A1W2PPC4 97 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 TARSL2A2RTX5 802 aaKnown RBP11.28□□□□□ -0.6
USP1-204ENST00000452143 PIK3R2O00459 728 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 SIN3BO75182 1162 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 MOCS3O95396 460 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
USP1-204ENST00000452143 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
USP1-204ENST00000452143 ACADSBP45954 432 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 RPL34P49207 117 aaKnown RBP11.28□□□□□ -0.6
USP1-204ENST00000452143 C21orf59P57076 290 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms