RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 CNGA4Q8IV77 575 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 FAM217AQ8IXS0 508 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 DDI1Q8WTU0 396 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 PRCCQ92733 491 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 SIPA1Q96FS4 1042 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 TOE1Q96GM8 510 aaKnown RBP14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 CHP1Q99653 195 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 MKRN2Q9H000 416 aaKnown RBP14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 SLC6A17Q9H1V8 727 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 HAUS4Q9H6D7 363 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 ARHGAP20Q9P2F6 1191 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 PCDHB9Q9Y5E1 797 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 PCDH15Q96QU1 1955 aa14.3□□□□□ -0.12
PDLIM2-213ENST00000448520 KNTC1P50748 2209 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 IGF2RP11717 2491 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 O00370 1275 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 XPO1O14980 1071 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 GJB3O75712 270 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 ACADMP11310 421 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 VDRP11473 427 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 HNRNPH3P31942 346 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 PTK2Q05397 1052 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 PDE4CQ08493 712 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 KLHL30Q0D2K2 578 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 TRIP4Q15650 581 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 MPPE1Q53F39 396 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 SGO2Q562F6 1265 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 TDRD12Q587J7 1177 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 DENND1BQ6P3S1 775 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 ZNF571Q7Z3V5 609 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 UBA3Q8TBC4 463 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 RNF139Q8WU17 664 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 ZNF606Q8WXB4 792 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 ERLEC1Q96DZ1 483 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 P2RY11Q96G91 374 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 PCDHB18PQ96TA0 734 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 SYT11Q9BT88 431 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 LRRC4Q9HBW1 653 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 HESX1Q9UBX0 185 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 KIAA1257Q9ULG3 409 aa14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 HBS1LQ9Y450 684 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-213ENST00000448520 METTL12A8MUP2 240 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 MEI4A8MW99 385 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 IGLV3-19P01714 112 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 NCAM1P13591 858 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 MAOBP27338 520 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 EIF4A3P38919 411 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 PRKCIP41743 596 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 TPMTP51580 245 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 BCAT1P54687 386 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 FMO1Q01740 532 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 CKAP5Q14008 2032 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 ZNF234Q14588 700 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 TRIP6Q15654 476 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 IL27RAQ6UWB1 636 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 DNAAF5Q86Y56 855 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 SYN2Q92777 582 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 TMA16Q96EY4 203 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 PPP1R9BQ96SB3 815 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 GPR174Q9BXC1 333 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 ULBP1Q9BZM6 244 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 CIPCQ9C0C6 399 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 PCED1AQ9H1Q7 454 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 CD93Q9NPY3 652 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 TSPAN16Q9UKR8 245 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 PLA2G4CQ9UP65 541 aa14.28□□□□□ -0.12
PDLIM2-213ENST00000448520 GOLGA6L6A8MZA4 724 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 M0QYV0 167 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 TULP2O00295 520 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 SH3BP5O60239 455 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 LATS1O95835 1130 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 SERPING1P05155 500 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 PTMAP06454 111 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 BPIFB4P59827 614 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 CDR2Q01850 454 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 CCDC173Q0VFZ6 552 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 BST2Q10589 180 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 MEA1Q16626 185 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 BSPRYQ5W0U4 402 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 SERPINA13PQ6UXR4 307 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 TMEM139Q8IV31 216 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 FMNL3Q8IVF7 1028 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 SCML4Q8N228 414 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 OR2I1PQ8NGU4 316 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 WFIKKN2Q8TEU8 576 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 KCTD13Q8WZ19 329 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 PANX2Q96RD6 677 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 AGPAT1Q99943 283 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 IRX2Q9BZI1 471 aaPredicted RBP14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 NUCKS1Q9H1E3 243 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 ABCC13Q9NSE7 274 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 STOML2Q9UJZ1 356 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 CLEC4EQ9ULY5 219 aa14.27□□□□□ -0.13
PDLIM2-213ENST00000448520 NUMA1Q14980 2115 aa14.26□□□□□ -0.13
PDLIM2-213ENST00000448520 SOWAHDA6NJG2 315 aa14.26□□□□□ -0.13
PDLIM2-213ENST00000448520 SRRM3A6NNA2 597 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-213ENST00000448520 DDX3XO00571 662 aaKnown RBP eCLIP14.26□□□□□ -0.139e-11■■■■■ 33.8
PDLIM2-213ENST00000448520 BCAT2O15382 392 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms