RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ZNF560Q96MR9 790 aa8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 KCNH6Q9H252 994 aa8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 BARX1Q9HBU1 254 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 EXOC1Q9NV70 894 aa8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 RBAKQ9NYW8 714 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 IGSF9Q9P2J2 1179 aa8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 EPS15L1Q9UBC2 864 aa8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 AFF4Q9UHB7 1163 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 ITGA11Q9UKX5 1188 aa8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 CDY1Q9Y6F8 540 aa8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 DOCK8Q8NF50 2099 aa8.33□□□□□ -1.08
SMARCE1-206ENST00000447024 TECTAO75443 2155 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 CLUHO75153 1309 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 PLXNA3P51805 1871 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 DENND4AQ7Z401 1863 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 GOLGA6L4A6NEF3 574 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 PRPF6O94906 941 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 ITGAVP06756 1048 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 FAM163BP0C2L3 166 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 LCP1P13796 627 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 LSAMPQ13449 338 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 PTPN21Q16825 1174 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 KNOP1Q1ED39 458 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 SV2CQ496J9 727 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 CTXN3Q4LDR2 81 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 ZBTB41Q5SVQ8 909 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 DSTYKQ6XUX3 929 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 DPH6Q7L8W6 267 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 ZNF227Q86WZ6 799 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 PPIL6Q8IXY8 311 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 C12orf76Q8N812 135 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 XXYLT1Q8NBI6 393 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 LEMD2Q8NC56 503 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 ZNF707Q96C28 371 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 PAGE5Q96GU1 130 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 CHAMP1Q96JM3 812 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 B3GALT6Q96L58 329 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 SENP8Q96LD8 212 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 FAM213AQ9BRX8 229 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 AGPAT3Q9NRZ7 376 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 DPP3Q9NY33 737 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 MYOTQ9UBF9 498 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 CACNG4Q9UBN1 327 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 TUBGCP4Q9UGJ1 667 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 HOOK1Q9UJC3 728 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 FBXL5Q9UKA1 691 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 SORCS3Q9UPU3 1222 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 R3HCC1Q9Y3T6 440 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 HS3ST3A1Q9Y663 406 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 ANK1P16157 1881 aa8.32□□□□□ -1.08
SMARCE1-206ENST00000447024 SCN1AP35498 2009 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 CACNA1HO95180 2353 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 A0A1B0GVL5 298 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 C2CD4DB7Z1M9 353 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 TISP43B9A030 160 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 PDXKO00764 312 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 ZNF197O14709 1029 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 KLRC4O43908 158 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 RHOBTB3O94955 611 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 TNNC2P02585 160 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 TMEM191BP0C7N4 346 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 RPL17P18621 184 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 AP3M2P53677 418 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 RBP5P82980 135 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 ROR1Q01973 937 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 ENPEPQ07075 957 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 SIGLEC14Q08ET2 396 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 GPR17Q13304 367 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 PLD1Q13393 1074 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 CUL4BQ13620 913 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 KCNB1Q14721 858 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 SF1Q15637 639 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 CRB2Q5IJ48 1285 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 METTL23Q86XA0 190 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 WDR49Q8IV35 697 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 ELOA2Q8IYF1 753 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 THEM5Q8N1Q8 247 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 TMEM86AQ8N2M4 240 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 ELMOD1Q8N336 334 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 SLC7A14Q8TBB6 771 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 C2orf15Q8WU43 125 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 SCFD1Q8WVM8 642 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 ANKRD36BP1Q96IX9 119 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 SEC16BQ96JE7 1060 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 CBWD1Q9BRT8 395 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 APOL5Q9BWW9 433 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 SEMA4AQ9H3S1 761 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 EPHX3Q9H6B9 360 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 GDAP2Q9NXN4 497 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 HSPBP1Q9NZL4 362 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 ASB3Q9Y575 518 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 C2orf16Q68DN1 1984 aa8.31□□□□□ -1.08
SMARCE1-206ENST00000447024 TRIOO75962 3097 aa8.3□□□□□ -1.08
SMARCE1-206ENST00000447024 WDR27A2RRH5 827 aa8.3□□□□□ -1.08
SMARCE1-206ENST00000447024 KPNA7A9QM74 516 aa8.3□□□□□ -1.08
SMARCE1-206ENST00000447024 PRRG1O14668 218 aa8.3□□□□□ -1.08
SMARCE1-206ENST00000447024 MAPK13O15264 365 aa8.3□□□□□ -1.08
SMARCE1-206ENST00000447024 ADAM12O43184 909 aa8.3□□□□□ -1.08
SMARCE1-206ENST00000447024 TGFB1I1O43294 461 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms