RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 HEBP1Q9NRV9 189 aa13.99□□□□□ -0.17
TM9SF4-204ENST00000442842 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.99□□□□□ -0.17
TM9SF4-204ENST00000442842 MPP6Q9NZW5 540 aa13.99□□□□□ -0.17
TM9SF4-204ENST00000442842 MARK1Q9P0L2 795 aa13.99□□□□□ -0.17
TM9SF4-204ENST00000442842 CA14Q9ULX7 337 aa13.99□□□□□ -0.17
TM9SF4-204ENST00000442842 PIAS3Q9Y6X2 628 aa13.99□□□□□ -0.17
TM9SF4-204ENST00000442842 KIF26AQ9ULI4 1882 aaPredicted RBP13.99□□□□□ -0.17
TM9SF4-204ENST00000442842 DOCK8Q8NF50 2099 aa13.99□□□□□ -0.17
TM9SF4-204ENST00000442842 BRWD1Q9NSI6 2320 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 CCDC66A2RUB6 948 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 H0Y626 953 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 HOXC11O43248 304 aaPredicted RBP13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 PENKP01210 267 aaPredicted RBP13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 MSNP26038 577 aaKnown RBP13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 HOXD9P28356 352 aaPredicted RBP13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 GJA4P35212 333 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 NUMBP49757 651 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 GNG11P61952 73 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 NRG1Q02297 640 aaPredicted RBP13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 MMRN1Q13201 1228 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 SEMA3BQ13214 749 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 CDH18Q13634 790 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 DPYSL3Q14195 570 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 ALFQ53S48 1182 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 MANEALQ5VSG8 457 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 NAIF1Q69YI7 327 aaPredicted RBP13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 RFX8Q6ZV50 586 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 C12orf40Q86WS4 652 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 CCDC117Q8IWD4 279 aaPredicted RBP13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 RNF25Q96BH1 459 aaPredicted RBP13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 PSMB7Q99436 277 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 DNAJC17Q9NVM6 304 aaKnown RBP13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 FBXL21Q9UKT6 434 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 NEU3Q9UQ49 428 aa13.98□□□□□ -0.17
TM9SF4-204ENST00000442842 A0A1B0GVM2 712 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 TCAF2A6NFQ2 919 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 MIF4GDA9UHW6 222 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 GFRA2O00451 464 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 ENC1O14682 589 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 DDX3YO15523 660 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 LUC7L3O95232 432 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 RWDD2BP57060 319 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 ZNF211Q13398 564 aaPredicted RBP13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 LLGL1Q15334 1064 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 RPS6KA1Q15418 735 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 IER5LQ5T953 404 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 MEI1Q5TIA1 1274 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 TPRG1Q6ZUI0 275 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 MAP7D3Q8IWC1 876 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 KATNAL2Q8IYT4 538 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 RBM41Q96IZ5 413 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 CSPG4P5Q96PW8 444 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 XPO6Q96QU8 1125 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 CATSPERBQ9H7T0 1116 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 SLC2A4RGQ9NR83 387 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 KCND1Q9NSA2 647 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 CWC15Q9P013 229 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 CLEC4EQ9ULY5 219 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 PCDHA3Q9Y5H8 950 aa13.97□□□□□ -0.17
TM9SF4-204ENST00000442842 IGLV3-10A0A075B6K4 115 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 DRGXA6NNA5 263 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 SPECC1L-ADORA2AF8WAN1 911 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 FGF10O15520 208 aaPredicted RBP13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 CLDN11O75508 207 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 RHOCP08134 193 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 RHOQP17081 205 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 KDELR1P24390 212 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 ARSEP51690 589 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 CDH4P55283 916 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 DYNLT1P63172 113 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 ZNF177Q13360 481 aaPredicted RBP13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 PDK2Q15119 407 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 KAZNQ674X7 775 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 MFSD7Q6UXD7 560 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 CHST9Q7L1S5 443 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 RFX6Q8HWS3 928 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 WFDC5Q8TCV5 224 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 ALG3Q92685 438 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 CHFRQ96EP1 664 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 HES6Q96HZ4 224 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 ZNF670Q9BS34 389 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 ARHGEF4Q9NR80 690 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 PPARGC1AQ9UBK2 798 aaKnown RBP13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 DNAI1Q9UI46 699 aa13.96□□□□□ -0.17
TM9SF4-204ENST00000442842 COL4A2P08572 1712 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 KCNK3O14649 394 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 TRIM24O15164 1050 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 CACNG3O60359 315 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 TULP3O75386 442 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 ZRANB2O95218 330 aaKnown RBP eCLIP13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 ATP1A1P05023 1023 aaKnown RBP13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 ERCC2P18074 760 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 AMPD1P23109 780 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 OR1E1P30953 314 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 HOXC13P31276 330 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 CTHP32929 405 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 HTR7P34969 479 aa13.95□□□□□ -0.18
TM9SF4-204ENST00000442842 SLC6A11P48066 632 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms