RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ZNF776Q68DI1 518 aaPredicted RBP8.07□□□□□ -1.12
CD44-211ENST00000442151 KIAA1211LQ6NV74 962 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 CREBRFQ8IUR6 639 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 MFN1Q8IWA4 741 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 DEFB119Q8N690 84 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 MSANTD4Q8NCY6 345 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 DEFB124Q8NES8 71 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 FAM149B1Q96BN6 582 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 GPR174Q9BXC1 333 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 INTS2Q9H0H0 1204 aaKnown RBP8.07□□□□□ -1.12
CD44-211ENST00000442151 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 TMEM74BQ9NUR3 256 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 ASNSD1Q9NWL6 643 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 CNTN6Q9UQ52 1028 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 NEUROG3Q9Y4Z2 214 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 RAD54BQ9Y620 910 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 EML5Q05BV3 1969 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 ZNF292O60281 2723 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 SPTBN2O15020 2390 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 PLXND1Q9Y4D7 1925 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 TPRP12270 2363 aaKnown RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 NUP205Q92621 2012 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 GTPBP10A4D1E9 387 aaKnown RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 THAP12O43422 761 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 IGLV3-27P01718 113 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 ABCB4P21439 1286 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 HOXD9P28356 352 aaPredicted RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 GNA15P30679 374 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 KRT9P35527 623 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 NUDT1P36639 197 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 MATKP42679 507 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 YWHAZP63104 245 aaKnown RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 CDH18Q13634 790 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 RABGAP1LQ5R372 815 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 DCAF12L1Q5VU92 463 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 PMF1Q6P1K2 205 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 USP30Q70CQ3 517 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 RRAGAQ7L523 313 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 PIP4P1Q86T03 277 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 TMEM110Q86TL2 294 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 ZDHHC17Q8IUH5 632 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 CYP4X1Q8N118 509 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 GANCQ8TET4 914 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 ZNF606Q8WXB4 792 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 RNF34Q969K3 372 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 TTC17Q96AE7 1141 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 BTN2A3PQ96KV6 586 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 MIR1-1HGQ9H1L0 117 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 PDCL3Q9H2J4 239 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 POPDC2Q9HBU9 364 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 CD248Q9HCU0 757 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 ZDHHC4Q9NPG8 344 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 ABCB8Q9NUT2 735 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 HCN2Q9UL51 889 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 FRYLO94915 3013 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 LRRC72A6NJI9 287 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 WASH3PC4AMC7 463 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 F5H5T6 163 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 MAGEC1O60732 1142 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 LETM1O95202 739 aaPredicted RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 S1PR4O95977 384 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 CDK4P11802 303 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 BRD2P25440 801 aaKnown RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 GPD2P43304 727 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 MTIF2P46199 727 aaKnown RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 RPL34P49207 117 aaKnown RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 AFF3P51826 1226 aaKnown RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 SIM1P81133 766 aaPredicted RBP8.06□□□□□ -1.12
CD44-211ENST00000442151 ARID5BQ14865 1188 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 EXOC3L4Q17RC7 722 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 SND1Q7KZF4 910 aaKnown RBP eCLIP8.06□□□□□ -1.12
CD44-211ENST00000442151 BHLHA9Q7RTU4 235 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 DSG4Q86SJ6 1040 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 SLC41A1Q8IVJ1 513 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 CARNMT1Q8N4J0 409 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 LMO3Q8TAP4 145 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 TFAP2BQ92481 460 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 TMEM245Q9H330 911 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 CHMP5Q9NZZ3 219 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 STIM2Q9P246 746 aa8.06□□□□□ -1.12
CD44-211ENST00000442151 ABCA7Q8IZY2 2146 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 MYO18AQ92614 2054 aaKnown RBP8.05□□□□□ -1.12
CD44-211ENST00000442151 EDDM13A0A1B0GTR0 161 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 RNF225M0QZC1 329 aaPredicted RBP8.05□□□□□ -1.12
CD44-211ENST00000442151 TULP2O00295 520 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 BIN1O00499 593 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 YKT6O15498 198 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 SEMA4FO95754 770 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 F9P00740 461 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 PRKCHP24723 683 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 HLA-FP30511 346 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 CCR1P32246 355 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 USP8P40818 1118 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 STX17P56962 302 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 C21orf59P57076 290 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 TRIP6Q15654 476 aaKnown RBP8.05□□□□□ -1.12
CD44-211ENST00000442151 MS4A13Q5J8X5 152 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 FAM46CQ5VWP2 391 aa8.05□□□□□ -1.12
CD44-211ENST00000442151 ADAT2Q7Z6V5 191 aaKnown RBP8.05□□□□□ -1.12
CD44-211ENST00000442151 SCUBE3Q8IX30 993 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms