RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 KPNA6O60684 536 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 AP1G2O75843 785 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 KLHL2O95198 593 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 AP2A1O95782 977 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SERPINE1P05121 402 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 MPOP05164 745 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SERPINA6P08185 405 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 ITGA2BP08514 1039 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 ERCC2P18074 760 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 PAX3P23760 479 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SERPINB6P35237 376 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SPRP35270 261 aaPredicted RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 PGM1P36871 562 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 RAP1GDS1P52306 607 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 AQP5P55064 265 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 MAP3K7CLP57077 242 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 COG7P83436 770 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 PPIDQ08752 370 aaKnown RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 TSNAXIP1Q2TAA8 658 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 CCDC153Q494R4 210 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 N4BP2L1Q5TBK1 243 aaPredicted RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 TAF2Q6P1X5 1199 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 RINLQ6ZS11 566 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 FAM35AQ86V20 835 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 C2orf69Q8N8R5 385 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 GPATCH11Q8N954 259 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 PPP4R1Q8TF05 950 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SREK1Q8WXA9 508 aaKnown RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 CERS2Q96G23 380 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 RILPQ96NA2 401 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SYT15Q9BQS2 421 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 TRIM62Q9BVG3 475 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 ULBP1Q9BZM6 244 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 NMUR2Q9GZQ4 415 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 CHST12Q9NRB3 414 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 KRT82Q9NSB4 513 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 RNF19AQ9NV58 838 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SYBUQ9NX95 663 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 DDX43Q9NXZ2 648 aaKnown RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 TAS2R1Q9NYW7 299 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 NKX1-2Q9UD57 310 aaPredicted RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 CDH9Q9ULB4 789 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 NUMBLQ9Y6R0 609 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SYNJ2BP-COX16A0A087WUM0 186 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 PTGESO14684 152 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 CIB2O75838 187 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 LTFP02788 710 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 MYL4P12829 197 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 YBX3P16989 372 aaKnown RBP eCLIP10.69□□□□□ -0.7
CD44-210ENST00000434472 ACAT1P24752 427 aaKnown RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 PTPN3P26045 913 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 TYK2P29597 1187 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 HOXC8P31273 242 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 NDUFV1P49821 464 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SERPINB8P50452 374 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 CSE1LP55060 971 aaKnown RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 SEMA3BQ13214 749 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 PDE1CQ14123 709 aaPredicted RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 HIC1Q14526 733 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 PRPSAP1Q14558 356 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 CCDC6Q16204 474 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 RAB41Q5JT25 222 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 PRAMEF19Q5SWL8 479 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SYPL2Q5VXT5 272 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 OLFML2BQ68BL8 750 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 MBLAC2Q68D91 279 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 DSTYKQ6XUX3 929 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 RSPH3Q86UC2 560 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SCML4Q8N228 414 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 CCDC33Q8N5R6 958 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
CD44-210ENST00000434472 ARRDC4Q8NCT1 418 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 NDRG1Q92597 394 aaKnown RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 STMN2Q93045 179 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 ISL2Q96A47 359 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 EPAS1Q99814 870 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 TRIM56Q9BRZ2 755 aaKnown RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 CASS4Q9NQ75 786 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 PIGVQ9NUD9 493 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 NSMCE4AQ9NXX6 385 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 COX16Q9P0S2 106 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 MID2Q9UJV3 735 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 TRPV2Q9Y5S1 764 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 B2RBV5 119 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 F8W8V4 182 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 H2AFYO75367 372 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 BEST1O76090 585 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 USP1O94782 785 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 PROCP04070 461 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 ALDOAP04075 364 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 RPLP2P05387 115 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 FGF3P11487 239 aaPredicted RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 PCSK1P29120 753 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 RPL9P32969 192 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 CYP2C18P33260 490 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 HADHAP40939 763 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 MAGEA12P43365 314 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 SLC1A6P48664 564 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 PITX1P78337 314 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms