RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 PCDHGC3Q9UN70 934 aa20.83■□□□□ 0.93
HLA-B-250ENST00000434333 SPEGQ15772 3267 aa20.83■□□□□ 0.92
HLA-B-250ENST00000434333 TYW5A2RUC4 315 aaKnown RBP20.82■□□□□ 0.92
HLA-B-250ENST00000434333 USP8P40818 1118 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 ZBTB16Q05516 673 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 PITRM1Q5JRX3 1037 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 DPY19L2P1Q6NXN4 242 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 LGI2Q8N0V4 545 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 SLC2A13Q96QE2 648 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 PRMT1Q99873 361 aaKnown RBP20.82■□□□□ 0.92
HLA-B-250ENST00000434333 ZDHHC5Q9C0B5 715 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 MIR1-1HGQ9H1L0 117 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 CHMP5Q9NZZ3 219 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 SUN2Q9UH99 717 aa20.82■□□□□ 0.92
HLA-B-250ENST00000434333 C1QTNF9BB2RNN3 333 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 BCAT2O15382 392 aaPredicted RBP20.81■□□□□ 0.92
HLA-B-250ENST00000434333 APOEP02649 317 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 ASLP04424 464 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 C1QTNF9P0C862 333 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 TACR2P21452 398 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 CTSOP43234 321 aaPredicted RBP20.81■□□□□ 0.92
HLA-B-250ENST00000434333 SIM1P81133 766 aaPredicted RBP20.81■□□□□ 0.92
HLA-B-250ENST00000434333 SLC14A1Q13336 389 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 CDH18Q13634 790 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 HNRNPA1L2Q32P51 320 aaKnown RBP20.81■□□□□ 0.92
HLA-B-250ENST00000434333 SMYD5Q6GMV2 418 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 CHSY1Q86X52 802 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 PASD1Q8IV76 773 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 DEFB106AQ8N104 65 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 BTN2A3PQ96KV6 586 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 CAMK1GQ96NX5 476 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 SCNM1Q9BWG6 230 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 RSPH9Q9H1X1 276 aaPredicted RBP20.81■□□□□ 0.92
HLA-B-250ENST00000434333 CLSTN2Q9H4D0 955 aa20.81■□□□□ 0.92
HLA-B-250ENST00000434333 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.81■□□□□ 0.92
HLA-B-250ENST00000434333 NYNRINQ9P2P1 1898 aaKnown RBP20.8■□□□□ 0.92
HLA-B-250ENST00000434333 SH3BP5O60239 455 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 SIN3BO75182 1162 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 DNTTP04053 509 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 GLI1P08151 1106 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 PNMA6AP0CW24 399 aaPredicted RBP20.8■□□□□ 0.92
HLA-B-250ENST00000434333 CLCN1P35523 988 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 MTIF2P46199 727 aaKnown RBP20.8■□□□□ 0.92
HLA-B-250ENST00000434333 ARID5BQ14865 1188 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 MAN2A1Q16706 1144 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 DPCR1Q3MIW9 517 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 ZNF776Q68DI1 518 aaPredicted RBP20.8■□□□□ 0.92
HLA-B-250ENST00000434333 UNQ6494/PRO21346Q6UXR6 183 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 KDM1BQ8NB78 822 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 C1orf131Q8NDD1 294 aaKnown RBP20.8■□□□□ 0.92
HLA-B-250ENST00000434333 PPP1R13BQ96KQ4 1090 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 ADAM33Q9BZ11 813 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 BTBD1Q9H0C5 482 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 IL21RQ9HBE5 538 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.8■□□□□ 0.92
HLA-B-250ENST00000434333 ASNSD1Q9NWL6 643 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 DNAJC12Q9UKB3 198 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 ERVW-1Q9UQF0 538 aa20.8■□□□□ 0.92
HLA-B-250ENST00000434333 ITIH6Q6UXX5 1313 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 WDFY3Q8IZQ1 3526 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 KCNU1A8MYU2 1149 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 HYAL3O43820 417 aaPredicted RBP20.79■□□□□ 0.92
HLA-B-250ENST00000434333 SEMA4FO95754 770 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 PROS1P07225 676 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 ST8SIA6P61647 398 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 MIIPQ5JXC2 388 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 OLFML1Q6UWY5 402 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 FAM183BPQ6ZVS7 135 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 APCDD1Q8J025 514 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 GATA6Q92908 595 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 ORAI3Q9BRQ5 295 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 KIAA1522Q9P206 1035 aaPredicted RBP20.79■□□□□ 0.92
HLA-B-250ENST00000434333 AKAP13Q12802 2813 aa20.79■□□□□ 0.92
HLA-B-250ENST00000434333 H0Y626 953 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 FOXN3O00409 490 aaPredicted RBP20.78■□□□□ 0.92
HLA-B-250ENST00000434333 HSF2BPO75031 334 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 ERBB2P04626 1255 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 SRPRAP08240 638 aaKnown RBP20.78■□□□□ 0.92
HLA-B-250ENST00000434333 PTK2Q05397 1052 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 TTC31Q49AM3 519 aaPredicted RBP20.78■□□□□ 0.92
HLA-B-250ENST00000434333 PTPN20Q4JDL3 420 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 C9orf64Q5T6V5 341 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 SLC47A2Q86VL8 602 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 CIR1Q86X95 450 aaPredicted RBP20.78■□□□□ 0.92
HLA-B-250ENST00000434333 DHX40Q8IX18 779 aaKnown RBP20.78■□□□□ 0.92
HLA-B-250ENST00000434333 ATP6V0D2Q8N8Y2 350 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 BIRC7Q96CA5 298 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 PABPC3Q9H361 631 aaKnown RBP20.78■□□□□ 0.92
HLA-B-250ENST00000434333 FAM204AQ9H8W3 233 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 DDIT4Q9NX09 232 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 SERGEFQ9UGK8 458 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 SLCO3A1Q9UIG8 710 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 CFAP47Q6ZTR5 3102 aa20.78■□□□□ 0.92
HLA-B-250ENST00000434333 A0A1B0GVT2 93 aa20.77■□□□□ 0.92
HLA-B-250ENST00000434333 TTC34A8MYJ7 566 aa20.77■□□□□ 0.92
HLA-B-250ENST00000434333 F5H5T6 163 aa20.77■□□□□ 0.92
HLA-B-250ENST00000434333 GRAP2O75791 330 aa20.77■□□□□ 0.92
HLA-B-250ENST00000434333 CDK17Q00537 523 aa20.77■□□□□ 0.92
HLA-B-250ENST00000434333 KCNMA1Q12791 1236 aa20.77■□□□□ 0.92
HLA-B-250ENST00000434333 HNRNPDQ14103 355 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms