RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 NOMO1Q15155 1222 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 TAZQ16635 292 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 CYP2A13Q16696 494 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 DOK7Q18PE1 504 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 PTPN20Q4JDL3 420 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 GPR107Q5VW38 600 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 EGFLAMQ63HQ2 1017 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 DENND1BQ6P3S1 775 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 SCARA5Q6ZMJ2 495 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 TMEM179Q6ZVK1 233 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 TMEM126BQ8IUX1 230 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 ZNF786Q8N393 782 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 ARHGEF1Q92888 912 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 SIGLEC10Q96LC7 697 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 ZNF597Q96LX8 424 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 PCDHAC1Q9H158 963 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 TCF7L2Q9NQB0 619 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 PNPLA3Q9NST1 481 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 COPG2Q9UBF2 871 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 SNX13Q9Y5W8 968 aa11.36□□□□□ -0.59
SEMA4D-209ENST00000429836 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 BCAS2O75934 225 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 GNAO1P09471 354 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 CKMT2P17540 419 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 HARS2P49590 506 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 CDH6P55285 790 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 SPIDRQ14159 915 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 ZNF829Q3KNS6 432 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 DCLRE1AQ6PJP8 1040 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 LYSMD3Q7Z3D4 306 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 NANOGNBQ7Z5D8 188 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 PEBP4Q96S96 227 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 NPAS2Q99743 824 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 CDH19Q9H159 772 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 CLK4Q9HAZ1 481 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 TRPC7Q9HCX4 862 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 CYTH4Q9UIA0 394 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 CORINQ9Y5Q5 1042 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 RGSL1A5PLK6 1076 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 ACOT8O14734 319 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 EXTL3O43909 919 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 CCDC130P13994 396 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 GLDCP23378 1020 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 LIG4P49917 911 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 SERPINB9P50453 376 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 ESRRGP62508 458 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 AARS2Q5JTZ9 985 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 C6orf183Q5T699 404 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 TMEM214Q6NUQ4 689 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 CASC4Q6P4E1 433 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 TMEM26Q6ZUK4 368 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 CMC1Q7Z7K0 106 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 SETD3Q86TU7 594 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 APBB2Q92870 758 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 ATXN7L3BQ96GX2 97 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 EBNA1BP2Q99848 306 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 HAPLN2Q9GZV7 340 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 SDCBP2Q9H190 292 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 HIPK3Q9H422 1215 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 RPF2Q9H7B2 306 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 EHMT1Q9H9B1 1298 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 C20orf96Q9NUD7 363 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 ADA2Q9NZK5 511 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 PAK5Q9P286 719 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 ARHGAP28Q9P2N2 729 aa11.35□□□□□ -0.59
SEMA4D-209ENST00000429836 H3BMQ9 156 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 BMP10O95393 424 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 METTL18O95568 372 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CST3P01034 146 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CAPNS1P04632 268 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 GRK2P25098 689 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 PSMC1P62191 440 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 ZBED5Q49AG3 693 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 WDR78Q5VTH9 848 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 KCNT2Q6UVM3 1135 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 ZNF534Q76KX8 674 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TMEM110Q86TL2 294 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TDRD5Q8NAT2 981 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 FAM110BQ8TC76 370 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 ACER1Q8TDN7 264 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CASP10Q92851 521 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 COG8Q96MW5 612 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 OSBPL11Q9BXB4 747 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 FAM96AQ9H5X1 160 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 NOL11Q9H8H0 719 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 NR2E3Q9Y5X4 410 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 WDR27A2RRH5 827 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 HTRA2O43464 458 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 VAPBO95292 243 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CHRNGP07510 517 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 ZNF12P17014 697 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 MPSTP25325 297 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 BMXP51813 675 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 ZNF132P52740 706 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 GNA12Q03113 381 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 ORC1Q13415 861 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 ART3Q13508 389 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms