RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 CAMK2GQ13555 558 aaPredicted RBP19.06■□□□□ 0.64
GPC1-205ENST00000427506 PTPRNQ16849 979 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 FSCBQ5H9T9 825 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 RABGAP1LQ5R372 815 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 SYCP2LQ5T4T6 812 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 DAB2IPQ5VWQ8 1189 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 NOP9Q86U38 636 aaKnown RBP19.06■□□□□ 0.64
GPC1-205ENST00000427506 SLC41A1Q8IVJ1 513 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 MSANTD4Q8NCY6 345 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 CEP76Q8TAP6 659 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 FOXJ1Q92949 421 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 GANQ9H2C0 597 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 WSB2Q9NYS7 404 aaPredicted RBP19.06■□□□□ 0.64
GPC1-205ENST00000427506 KIAA1522Q9P206 1035 aaPredicted RBP19.06■□□□□ 0.64
GPC1-205ENST00000427506 SUN2Q9UH99 717 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 PLXND1Q9Y4D7 1925 aa19.06■□□□□ 0.64
GPC1-205ENST00000427506 ASLP04424 464 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 MMEP08473 750 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 CDH5P33151 784 aaPredicted RBP19.05■□□□□ 0.64
GPC1-205ENST00000427506 CSKP41240 450 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 MATKP42679 507 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 COPB1P53618 953 aaKnown RBP19.05■□□□□ 0.64
GPC1-205ENST00000427506 MTA1Q13330 715 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 DUOXA1Q1HG43 343 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 PITRM1Q5JRX3 1037 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 FAM102AQ5T9C2 384 aaPredicted RBP19.05■□□□□ 0.64
GPC1-205ENST00000427506 SLC23A3Q6PIS1 610 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 MMS22LQ6ZRQ5 1243 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 RABEPKQ7Z6M1 372 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 ZNF397Q8NF99 534 aaPredicted RBP19.05■□□□□ 0.64
GPC1-205ENST00000427506 TTC17Q96AE7 1141 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 ZNF419Q96HQ0 510 aaPredicted RBP19.05■□□□□ 0.64
GPC1-205ENST00000427506 LMLNQ96KR4 655 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 SPAG5Q96R06 1193 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 GPR174Q9BXC1 333 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 NLRC4Q9NPP4 1024 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 RRN3Q9NYV6 651 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.05■□□□□ 0.64
GPC1-205ENST00000427506 STAP1Q9ULZ2 295 aa19.05■□□□□ 0.64
GPC1-205ENST00000427506 MEI4A8MW99 385 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 LSM8O95777 96 aaKnown RBP19.04■□□□□ 0.64
GPC1-205ENST00000427506 MAPK8P45983 427 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 SULT1E1P49888 294 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 ATXN3P54252 364 aaPredicted RBP19.04■□□□□ 0.64
GPC1-205ENST00000427506 UAP1L1Q3KQV9 507 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 WDR45BQ5MNZ6 344 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 TTC39BQ5VTQ0 682 aaPredicted RBP19.04■□□□□ 0.64
GPC1-205ENST00000427506 PEAR1Q5VY43 1037 aaPredicted RBP19.04■□□□□ 0.64
GPC1-205ENST00000427506 RNF219Q5W0B1 726 aaPredicted RBP19.04■□□□□ 0.64
GPC1-205ENST00000427506 SND1Q7KZF4 910 aaKnown RBP eCLIP19.04■□□□□ 0.645e-6■□□□□ 9.7
GPC1-205ENST00000427506 FAM124AQ86V42 546 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 CIR1Q86X95 450 aaPredicted RBP19.04■□□□□ 0.64
GPC1-205ENST00000427506 EPS8L1Q8TE68 723 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 NUP205Q92621 2012 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 RPRD1AQ96P16 312 aaPredicted RBP19.04■□□□□ 0.64
GPC1-205ENST00000427506 NUP58Q9BVL2 599 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 FBRSQ9HAH7 460 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 PRSS16Q9NQE7 514 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 INTS6Q9UL03 887 aaKnown RBP19.04■□□□□ 0.64
GPC1-205ENST00000427506 SLC6A14Q9UN76 642 aa19.04■□□□□ 0.64
GPC1-205ENST00000427506 GOLGA8SH3BPF8 625 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 TM4SF5O14894 197 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 DNTTP04053 509 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 ENGP17813 658 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 GABRB2P47870 512 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 GFPT1Q06210 699 aaPredicted RBP19.03■□□□□ 0.64
GPC1-205ENST00000427506 SYCP1Q15431 976 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 C2CD6Q53TS8 623 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 NAA35Q5VZE5 725 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 ZNF677Q86XU0 584 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 XYLT1Q86Y38 959 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 CCAR2Q8N163 923 aaKnown RBP19.03■□□□□ 0.64
GPC1-205ENST00000427506 NEK11Q8NG66 645 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 CPA5Q8WXQ8 436 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 PRMT1Q99873 361 aaKnown RBP19.03■□□□□ 0.64
GPC1-205ENST00000427506 GTPBP2Q9BX10 602 aaKnown RBP19.03■□□□□ 0.64
GPC1-205ENST00000427506 SIK2Q9H0K1 926 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 WDCPQ9H6R7 721 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 LIMA1Q9UHB6 759 aaKnown RBP19.03■□□□□ 0.64
GPC1-205ENST00000427506 ERVW-1Q9UQF0 538 aa19.03■□□□□ 0.64
GPC1-205ENST00000427506 A0A1B0GVM2 712 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 TCAF2A6NFQ2 919 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 CDX4O14627 284 aaPredicted RBP19.02■□□□□ 0.64
GPC1-205ENST00000427506 SERPINF2P08697 491 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 GNSP15586 552 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 MAOBP27338 520 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 SOX5P35711 763 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 SCNN1AP37088 669 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 STAT1P42224 750 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 UBXN1Q04323 297 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 DEUP1Q05D60 604 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 TYRO3Q06418 890 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 SLC12A1Q13621 1099 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 AUHQ13825 339 aaKnown RBP19.02■□□□□ 0.64
GPC1-205ENST00000427506 PLEKHG6Q3KR16 790 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 FBXL22Q6P050 247 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 APCDD1Q8J025 514 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 CADM4Q8NFZ8 388 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 SLC20A1Q8WUM9 679 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 NPY6RQ99463 290 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms