RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SUN2Q9UH99 717 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 ADAMTS1Q9UHI8 967 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 FZD4Q9ULV1 537 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 TRAF3IP3Q9Y228 551 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 NCKAP1Q9Y2A7 1128 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 FRMD4BQ9Y2L6 1034 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 AK5Q9Y6K8 562 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 SHROOM3Q8TF72 1996 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 MAST4O15021 2626 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 A0A1W2PP55 124 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 FAM47DPA6NHR8 397 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 TULP2O00295 520 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 WNT9AO14904 365 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 MID1O15344 667 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 MSI1O43347 362 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 SIN3BO75182 1162 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 IGLV3-27P01718 113 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 POLR2EP19388 210 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 CD38P28907 300 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 RXRGP48443 463 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 ARRB1P49407 418 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 CCR5P51681 352 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 NXPH1P58417 271 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 CST6Q15828 149 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 NFIL3Q16649 462 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 HNRNPA1L2Q32P51 320 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 TBC1D25Q3MII6 688 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 KMT5BQ4FZB7 885 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 FAM133BQ5BKY9 247 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 PIK3R6Q5UE93 754 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 RESP18Q5W5W9 173 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 INTS8Q75QN2 995 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 ERICH1Q86X53 443 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 TTC39CQ8N584 583 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 DCBLD1Q8N8Z6 715 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 ZNF557Q8N988 423 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 FGF11Q92914 225 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 TTC17Q96AE7 1141 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 TMEM176AQ96HP8 235 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 MRGPRX3Q96LB0 322 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 ZNF396Q96N95 335 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 NEUROG2Q9H2A3 272 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 ERVMER34-1Q9H9K5 563 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 TMEM8AQ9HCN3 771 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 AASDHPPTQ9NRN7 309 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 CISHQ9NSE2 258 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 EXOC1Q9NV70 894 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 SFMBT1Q9UHJ3 866 aa10.61□□□□□ -0.71
TNFAIP3-202ENST00000420009 LRRC72A6NJI9 287 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 YJEFN3A6XGL0 299 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 E7ENQ6 273 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 CAPN9O14815 690 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 XPO1O14980 1071 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 IRAK2O43187 625 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 LATO43561 262 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 ACTN4O43707 911 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 ASLP04424 464 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 PDIA4P13667 645 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 CKMT2P17540 419 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 SLC6A4P31645 630 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 ADPRHP54922 357 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 SLC8A3P57103 927 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 MCCD1P59942 119 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 CFHR1Q03591 330 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 ADIGQ0VDE8 80 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 SFSWAPQ12872 951 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 C9orf64Q5T6V5 341 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 BSPRYQ5W0U4 402 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 MSANTD2Q6P1R3 559 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 RFWD3Q6PCD5 774 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 SPACA3Q8IXA5 215 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 OXR1Q8N573 874 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 KDM1BQ8NB78 822 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 GANCQ8TET4 914 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 RNF139Q8WU17 664 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 EDEM1Q92611 657 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 SEMA4DQ92854 862 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 PRICKLE1Q96MT3 831 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 FAM13BQ9NYF5 915 aa10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 INTS6Q9UL03 887 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 TPX2Q9ULW0 747 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-202ENST00000420009 ITIH6Q6UXX5 1313 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 CAPN8A6NHC0 703 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 J3QKU1 62 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 ERVH48-1M5A8F1 160 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 TLR4O00206 839 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 CALUO43852 315 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 TBL1XO60907 577 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 RNASEH1O60930 286 aaKnown RBP10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 RNASEH2AO75792 299 aaKnown RBP10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 GLDCP23378 1020 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 NR2F2P24468 414 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 ACP1P24666 158 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 GTF2H1P32780 548 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 ACTN2P35609 894 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 CSKP41240 450 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 ST8SIA6P61647 398 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 INSM1Q01101 510 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 BNIP3Q12983 259 aa10.59□□□□□ -0.71
TNFAIP3-202ENST00000420009 GOLGA7BQ2TAP0 167 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms