RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RNF44Q7L0R7 432 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 ST13P5Q8NFI4 369 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 ROGDIQ9GZN7 287 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 ZNF112Q9UJU3 913 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 CARNS1A5YM72 827 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 TM9SF1O15321 606 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 CD151P48509 253 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 SPOCD1Q6ZMY3 1216 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 MARK2Q7KZI7 788 aaKnown RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 RBM23Q86U06 439 aaKnown RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 FAM228AQ86W67 206 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 OR8H2Q8N162 312 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 UXS1Q8NBZ7 420 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 ASZ1Q8WWH4 475 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 TBL1YQ9BQ87 522 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 VAV1P15498 845 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 YBX3P16989 372 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTCH1-205ENST00000418258 FGD3Q5JSP0 725 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 PRAMEF19Q5SWL8 479 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 RAD9BQ6WBX8 426 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 ZNF558Q96NG5 402 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 APBA2Q99767 749 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 H3BN98 237 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 GNRH1P01148 92 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CDH8P55286 799 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 COX10Q12887 443 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MARCH2Q9P0N8 246 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 DNAJC16Q9Y2G8 782 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 UMODL1Q5DID0 1318 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 ANKDD1BA6NHY2 528 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MEI4A8MW99 385 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 SLCO1B7G3V0H7 640 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 IGF2BP3O00425 579 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTCH1-205ENST00000418258 PEX1O43933 1283 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MT-CO1P00395 513 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 IL1BP01584 269 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 PSMC3P17980 439 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 FMO4P31512 558 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 RCN1Q15293 331 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CXCL17Q6UXB2 119 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 BNC2Q6ZN30 1099 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CEP68Q76N32 757 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 DNAJC9Q8WXX5 260 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 C19orf60Q96EN9 201 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 P2RX7Q99572 595 aaKnown RBP11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CATSPERZQ9NTU4 200 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 STK39Q9UEW8 545 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 GPN3Q9UHW5 284 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-205ENST00000418258 DNMT3LQ9UJW3 386 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 ZNF232Q9UNY5 417 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 SMNDC1O75940 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CREMQ03060 361 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 TROAPQ12815 778 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 DGKKQ5KSL6 1271 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CASP12Q6UXS9 341 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 RERGQ96A58 199 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-205ENST00000418258 ELMO3Q96BJ8 720 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 KLHL1Q9NR64 748 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 PCDHB9Q9Y5E1 797 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MROH7Q68CQ1 1323 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MYH11P35749 1972 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 RECQL4O94761 1208 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CPA3P15088 417 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 RANBP1P43487 201 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MMP13P45452 471 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 GANQ9H2C0 597 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 PIPSLA2A3N6 862 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 WDR27A2RRH5 827 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CCT8L1PA6NM43 557 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 FAM25AB3EWG3 89 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 FAM25CB3EWG5 89 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 FAM25GB3EWG6 89 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CES2O00748 559 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MAGEA10P43363 369 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-205ENST00000418258 IL2P60568 153 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CNTN2Q02246 1040 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 GRTP1Q5TC63 336 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 PDPK2PQ6A1A2 396 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 BTBD9Q96Q07 612 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 GAD1Q99259 594 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 AASDHPPTQ9NRN7 309 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 OR10H2O60403 315 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 SKIV2L2P42285 1042 aaKnown RBP11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CCL23P55773 120 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 CDH17Q12864 832 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MILR1Q7Z6M3 343 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 TMEM132CQ8N3T6 1108 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MAGEB18Q96M61 343 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 HTATIP2Q9BUP3 242 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 PACSIN1Q9BY11 444 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 KIAA1683Q9H0B3 1180 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 SERHL2Q9H4I8 314 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 SERHLQ9NQF3 203 aa11.44□□□□□ -0.58
PTCH1-205ENST00000418258 MYH6P13533 1939 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 CTDNEP1O95476 244 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SNRPD1P62314 119 aaKnown RBP11.43□□□□□ -0.58
PTCH1-205ENST00000418258 GPR141Q7Z602 305 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 EID3Q8N140 333 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 TMC2Q8TDI7 906 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 TATDN2Q93075 761 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms