RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SLC5A3P53794 718 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 DRAP1Q14919 205 aaPredicted RBP18.74■□□□□ 0.59
VCP-202ENST00000417448 SUZ12Q15022 739 aaKnown RBP18.74■□□□□ 0.59
VCP-202ENST00000417448 LAYNQ6UX15 382 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 CACUL1Q86Y37 369 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 BHMTQ93088 406 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 GANQ9H2C0 597 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 CSNK1G1Q9HCP0 422 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 NLRC4Q9NPP4 1024 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 IL37Q9NZH6 218 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 SPTA1P02549 2419 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 PIK3R2O00459 728 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 PAEPP09466 180 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 COPAP53621 1224 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 SEMG2Q02383 582 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 PDE4CQ08493 712 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 ENPP2Q13822 863 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 STARD3Q14849 445 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 KCNT1Q5JUK3 1230 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 TMPRSS12Q86WS5 348 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 TMPRSS6Q8IU80 811 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 SHC3Q92529 594 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 NDRG1Q92597 394 aaKnown RBP18.73■□□□□ 0.59
VCP-202ENST00000417448 RTN4Q9NQC3 1192 aaKnown RBP18.73■□□□□ 0.59
VCP-202ENST00000417448 PLK2Q9NYY3 685 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 WDR35Q9P2L0 1181 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 CNTN6Q9UQ52 1028 aa18.73■□□□□ 0.59
VCP-202ENST00000417448 PLXNA2O75051 1894 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 FAM92AA1XBS5 289 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 THAP12O43422 761 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 TBX18O95935 607 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 UCHL3P15374 230 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 OXTRP30559 389 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 CLCN1P35523 988 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 RGS7P49802 495 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 AFF3P51826 1226 aaKnown RBP18.72■□□□□ 0.59
VCP-202ENST00000417448 POLR2FP61218 127 aaKnown RBP18.72■□□□□ 0.59
VCP-202ENST00000417448 FANCCQ00597 558 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 IL9RQ01113 521 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 CFHR1Q03591 330 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 DENND1BQ6P3S1 775 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 LRRC69Q6ZNQ3 347 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 ANKRD52Q8NB46 1076 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 SNX19Q92543 992 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 SIPA1Q96FS4 1042 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 NAA15Q9BXJ9 866 aaKnown RBP18.72■□□□□ 0.59
VCP-202ENST00000417448 KLF16Q9BXK1 252 aaPredicted RBP18.72■□□□□ 0.59
VCP-202ENST00000417448 DNAI2Q9GZS0 605 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 C6orf106Q9H6K1 298 aaPredicted RBP18.72■□□□□ 0.59
VCP-202ENST00000417448 ANKRD6Q9Y2G4 727 aa18.72■□□□□ 0.59
VCP-202ENST00000417448 H0Y8X5 98 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 GOLGA6L19H0YKK7 550 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 M0QYV0 167 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 PCDHGA12O60330 932 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 TLR5O60602 858 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 GABBR2O75899 941 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 SERPINC1P01008 464 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 CNGA2Q16280 664 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 LCLAT1Q6UWP7 414 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 ENOSF1Q7L5Y1 443 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 PIGZQ86VD9 579 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 SLC47A2Q86VL8 602 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 NUP58Q9BVL2 599 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 NACA2Q9H009 215 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 THAP10Q9P2Z0 257 aaPredicted RBP18.71■□□□□ 0.59
VCP-202ENST00000417448 HESX1Q9UBX0 185 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 FBXO10Q9UK96 956 aa18.71■□□□□ 0.59
VCP-202ENST00000417448 TEX51A0A1B0GUA7 166 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 CBX4O00257 560 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 CAPN9O14815 690 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 GNA15P30679 374 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 CCT8P50990 548 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 GEN1Q17RS7 908 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 GPR155Q7Z3F1 870 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 FAM124AQ86V42 546 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 PASD1Q8IV76 773 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 NEK11Q8NG66 645 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 ZNF606Q8WXB4 792 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 PRCCQ92733 491 aaPredicted RBP18.7■□□□□ 0.58
VCP-202ENST00000417448 IGSF8Q969P0 613 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 TM9SF3Q9HD45 589 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 PLCB1Q9NQ66 1216 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 FTSJ1Q9UET6 329 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 DNMT3LQ9UJW3 386 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 KIAA1257Q9ULG3 409 aa18.7■□□□□ 0.58
VCP-202ENST00000417448 PYCARD-AS1I3L0S3 204 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 LCP1P13796 627 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 ACSL1P33121 698 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 TPM4P67936 248 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 BST2Q10589 180 aaKnown RBP18.69■□□□□ 0.58
VCP-202ENST00000417448 PKDCCQ504Y2 493 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 C6orf118Q5T5N4 469 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 PMF1Q6P1K2 205 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 FAM71AQ8IYT1 594 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 SNIP1Q8TAD8 396 aaKnown RBP18.69■□□□□ 0.58
VCP-202ENST00000417448 ERGIC2Q96RQ1 377 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 STK33Q9BYT3 514 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 NMUR1Q9HB89 426 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 OSER1Q9NX31 292 aa18.69■□□□□ 0.58
VCP-202ENST00000417448 CYTH4Q9UIA0 394 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms