RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	TRIM67	Q6ZTA4	783 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	NUDT18	Q6ZVK8	323 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.57	□□□□□ -0.24
SF1-206	ENST00000413725	CHST9	Q7L1S5	443 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	POLN	Q7Z5Q5	900 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	C14orf80	Q86SX3	495 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	MFN1	Q8IWA4	741 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	ETFBKMT	Q8IXQ9	262 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	ZNF683	Q8IZ20	524 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	SYCE1	Q8N0S2	351 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	KIAA1524	Q8TCG1	905 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	HSPH1	Q92598	858 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	CD101	Q93033	1021 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	IGSF8	Q969P0	613 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	MYEOV	Q96EZ4	313 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	PNKP	Q96T60	521 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	P2RY13	Q9BPV8	354 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.57	□□□□□ -0.24
SF1-206	ENST00000413725	ZYG11B	Q9C0D3	744 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	MFSD1	Q9H3U5	465 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	LZTFL1	Q9NQ48	299 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
SF1-206	ENST00000413725	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.57	□□□□□ -0.24
SF1-206	ENST00000413725	GUCA1B	Q9UMX6	200 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725		A0A0U1RQJ8	604 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	DRGX	A6NNA5	263 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725		H0Y626	953 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	STK25	O00506	426 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	CLDN11	O75508	207 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	LRIG2	O94898	1065 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	MOCS3	O95396	460 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	APOD	P05090	189 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	RARA	P10276	462 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	ARL4A	P40617	200 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	CDH4	P55283	916 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	OXCT1	P55809	520 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	TAS2R40	P59535	323 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	TPI1	P60174	286 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	KDSR	Q06136	332 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SF1-206	ENST00000413725	KRT81	Q14533	505 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	PON2	Q15165	354 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	DPYSL2	Q16555	572 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	ODF2	Q5BJF6	829 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	KCNT1	Q5JUK3	1230 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	MANEAL	Q5VSG8	457 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	LRRC38	Q5VT99	294 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	RNF43	Q68DV7	783 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	TXNDC11	Q6PKC3	985 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	C12orf40	Q86WS4	652 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	CPNE8	Q86YQ8	564 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	RHOT1	Q8IXI2	618 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	CCAR2	Q8N163	923 aa	Known RBP	13.56	□□□□□ -0.24
SF1-206	ENST00000413725	PYROXD2	Q8N2H3	581 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	CARNMT1	Q8N4J0	409 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	ATRIP	Q8WXE1	791 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	CHFR	Q96EP1	664 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	NELL2	Q99435	816 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	RETREG1	Q9H6L5	497 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	CATSPERB	Q9H7T0	1116 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	TBC1D17	Q9HA65	648 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	ARHGEF4	Q9NR80	690 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SF1-206	ENST00000413725	ALG6	Q9Y672	507 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.56	□□□□□ -0.24
SF1-206	ENST00000413725	MUC3A	Q02505	3323 aa		13.56	□□□□□ -0.24
SF1-206	ENST00000413725	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.55	□□□□□ -0.24
SF1-206	ENST00000413725	KANSL1L	A0AUZ9	987 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	GRID2IP	A4D2P6	1211 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	TMEM221	A6NGB7	291 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	FAM72C	H0Y354	149 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725		H3BRJ5	948 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725		M0R296	226 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	EEF2K	O00418	725 aa	Known RBP	13.55	□□□□□ -0.24
SF1-206	ENST00000413725	FGF10	O15520	208 aa	Predicted RBP	13.55	□□□□□ -0.24
SF1-206	ENST00000413725	PSTPIP1	O43586	416 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	TNNT1	P13805	278 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	DRD1	P21728	446 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	EPHB2	P29323	1055 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	SLC6A11	P48066	632 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	GALK1	P51570	392 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	CDH6	P55285	790 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	SEMA3B	Q13214	749 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	ZNF177	Q13360	481 aa	Predicted RBP	13.55	□□□□□ -0.24
SF1-206	ENST00000413725	UBXN2B	Q14CS0	331 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	PDK2	Q15119	407 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	CA9	Q16790	459 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	FAM72A	Q5TYM5	149 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	TXNRD3NB	Q6F5E7	133 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	FAM72D	Q6L9T8	149 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	FAM72B	Q86X60	149 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	CIR1	Q86X95	450 aa	Predicted RBP	13.55	□□□□□ -0.24
SF1-206	ENST00000413725	MAP7D3	Q8IWC1	876 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	FIBIN	Q8TAL6	211 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	P2RY11	Q96G91	374 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	ALS2CR12	Q96Q35	445 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	KCTD15	Q96SI1	283 aa	Predicted RBP	13.55	□□□□□ -0.24
SF1-206	ENST00000413725	MAGEB5	Q9BZ81	275 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	GOLPH3	Q9H4A6	298 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	DDX56	Q9NY93	547 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms