RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 STAU2Q9NUL3 570 aaKnown RBP eCLIP30.27■■■□□ 2.44
USP42-202ENST00000404008 DNAJC17Q9NVM6 304 aaKnown RBP30.27■■■□□ 2.44
USP42-202ENST00000404008 CLEC4EQ9ULY5 219 aa30.27■■■□□ 2.44
USP42-202ENST00000404008 GUCA1BQ9UMX6 200 aa30.27■■■□□ 2.44
USP42-202ENST00000404008 NEU3Q9UQ49 428 aa30.27■■■□□ 2.44
USP42-202ENST00000404008 GRID2IPA4D2P6 1211 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 SPOPO43791 374 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 LRIG2O94898 1065 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 ZNF852Q6ZMS4 543 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 POLNQ7Z5Q5 900 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 LRRC57Q8N9N7 239 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 FAM3CQ92520 227 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 CD101Q93033 1021 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 KCTD15Q96SI1 283 aaPredicted RBP30.26■■■□□ 2.43
USP42-202ENST00000404008 EPAS1Q99814 870 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 P2RY13Q9BPV8 354 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 SLC2A11Q9BYW1 496 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 LZTFL1Q9NQ48 299 aa30.26■■■□□ 2.43
USP42-202ENST00000404008 A0A1B0GVM2 712 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 TCAF2A6NFQ2 919 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 PALM2-AKAP2B1ALY0 433 aaPredicted RBP30.25■■■□□ 2.43
USP42-202ENST00000404008 KRT7P08729 469 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 CD72P21854 359 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 GALK1P51570 392 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 DPYSL2Q16555 572 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 CCAR2Q8N163 923 aaKnown RBP30.25■■■□□ 2.43
USP42-202ENST00000404008 PHTF2Q8N3S3 785 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 TBC1D31Q96DN5 1066 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 ZYG11BQ9C0D3 744 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 FBRSL1Q9HCM7 1045 aaKnown RBP30.25■■■□□ 2.43
USP42-202ENST00000404008 DEC1Q9P2X7 70 aa30.25■■■□□ 2.43
USP42-202ENST00000404008 TECTAO75443 2155 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 CNTN5O94779 1100 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 LUC7L3O95232 432 aaKnown RBP30.24■■■□□ 2.43
USP42-202ENST00000404008 CISD3P0C7P0 127 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 GJC1P36383 396 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 PON2Q15165 354 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 ALFQ53S48 1182 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 LRRC38Q5VT99 294 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 CHST9Q7L1S5 443 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 MFN1Q8IWA4 741 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 CARNMT1Q8N4J0 409 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 KIAA1524Q8TCG1 905 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 WFDC5Q8TCV5 224 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 EXOC4Q96A65 974 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 PNKPQ96T60 521 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 MPP6Q9NZW5 540 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 CAPN6Q9Y6Q1 641 aa30.24■■■□□ 2.43
USP42-202ENST00000404008 F5P12259 2224 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 TRIM24O15164 1050 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 CREB3O43889 395 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 CLDN11O75508 207 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 HOXC13P31276 330 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 HTR7P34969 479 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 DGKGP49619 791 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 CDH4P55283 916 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 MESP2Q0VG99 397 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 ATP13A4Q4VNC1 1196 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 PPP6R3Q5H9R7 873 aaPredicted RBP30.23■■■□□ 2.43
USP42-202ENST00000404008 TMEM196Q5HYL7 178 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 ASTLQ6HA08 431 aaPredicted RBP30.23■■■□□ 2.43
USP42-202ENST00000404008 RWDD4Q6NW29 188 aaKnown RBP30.23■■■□□ 2.43
USP42-202ENST00000404008 RHOT1Q8IXI2 618 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 PYCARDQ9ULZ3 195 aa30.23■■■□□ 2.43
USP42-202ENST00000404008 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.23■■■□□ 2.43
USP42-202ENST00000404008 PALMO75781 387 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 KDSRQ06136 332 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 CDH18Q13634 790 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 GRAMD4Q6IC98 578 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 SUGP1Q8IWZ8 645 aaKnown RBP30.22■■■□□ 2.43
USP42-202ENST00000404008 ZNF557Q8N988 423 aaPredicted RBP30.22■■■□□ 2.43
USP42-202ENST00000404008 FIBINQ8TAL6 211 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 FAM71BQ8TC56 605 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 TBC1D17Q9HA65 648 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 ARHGEF4Q9NR80 690 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 ZNF212Q9UDV6 495 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 SLC27A6Q9Y2P4 619 aa30.22■■■□□ 2.43
USP42-202ENST00000404008 KANSL1LA0AUZ9 987 aa30.21■■■□□ 2.43
USP42-202ENST00000404008 H0Y626 953 aa30.21■■■□□ 2.43
USP42-202ENST00000404008 ZSCAN12O43309 604 aa30.21■■■□□ 2.43
USP42-202ENST00000404008 ARSEP51690 589 aa30.21■■■□□ 2.43
USP42-202ENST00000404008 ZNF135P52742 658 aaPredicted RBP30.21■■■□□ 2.43
USP42-202ENST00000404008 PREPLQ4J6C6 727 aaPredicted RBP30.21■■■□□ 2.43
USP42-202ENST00000404008 ZNF687Q8N1G0 1237 aa30.21■■■□□ 2.43
USP42-202ENST00000404008 RETREG1Q9H6L5 497 aa30.21■■■□□ 2.43
USP42-202ENST00000404008 PCDH18Q9HCL0 1135 aa30.21■■■□□ 2.43
USP42-202ENST00000404008 TMEM221A6NGB7 291 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 M0R296 226 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 EEF2KO00418 725 aaKnown RBP30.2■■■□□ 2.43
USP42-202ENST00000404008 PSTPIP1O43586 416 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 RHOQP17081 205 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 GOT1P17174 413 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 EPHB2P29323 1055 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 HLA-FP30511 346 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 TPI1P60174 286 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 FSCBQ5H9T9 825 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 FSTL4Q6MZW2 842 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 CXorf57Q6NSI4 855 aaKnown RBP30.2■■■□□ 2.43
USP42-202ENST00000404008 TFAP2DQ7Z6R9 452 aa30.2■■■□□ 2.43
USP42-202ENST00000404008 NLRP14Q86W24 1093 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms