RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RNPEPL1Q9HAU8 725 aa16.41■□□□□ 0.22
CHRFAM7A-203ENST00000401522 RAB6BQ9NRW1 208 aa16.41■□□□□ 0.22
CHRFAM7A-203ENST00000401522 STK39Q9UEW8 545 aa16.41■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ZNF180Q9UJW8 692 aa16.41■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TSPAN16Q9UKR8 245 aa16.41■□□□□ 0.22
CHRFAM7A-203ENST00000401522 MTO1Q9Y2Z2 717 aaKnown RBP16.41■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ZNF487B1APH4 448 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TRDMT1O14717 391 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 KCNN4O15554 427 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 DNAJC6O75061 913 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 CBX6O95503 412 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 GSTA2P09210 222 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 FGFR3P22607 806 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 WARSP23381 471 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 YWHAZP63104 245 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 MTM1Q13496 603 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 CRYMQ14894 314 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 RAB30Q15771 203 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 CTC1Q2NKJ3 1217 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 C15orf59Q2T9L4 293 aaPredicted RBP16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 FAM171A1Q5VUB5 890 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 DDX53Q86TM3 631 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ADGRF2Q8IZF7 708 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 RFWD2Q8NHY2 731 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 VN1R3Q9BXE9 311 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 KLC2Q9H0B6 622 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 BATF3Q9NR55 127 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 DCTN4Q9UJW0 460 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 YBX2Q9Y2T7 364 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TTLL3Q9Y4R7 772 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 GBF1Q92538 1859 aa16.4■□□□□ 0.22
CHRFAM7A-203ENST00000401522 C5orf67F2Z3F1 127 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KLF11O14901 512 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KRT37O76014 449 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 FGF18O76093 207 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 OAZ2O95190 189 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ZBED1O96006 694 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SETSIPP0DME0 302 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PYGBP11216 843 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GNL1P36915 607 aaPredicted RBP16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PBX2P40425 430 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LHX1P48742 406 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NRLP54845 237 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PRKD1Q15139 912 aaPredicted RBP16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GOLGA7BQ2TAP0 167 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CCDC14Q49A88 953 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LGSNQ5TDP6 509 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SLC9A4Q6AI14 798 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 UNC93AQ86WB7 457 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PTPRN2Q92932 1015 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LRRC39Q96DD0 335 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CFAP36Q96G28 342 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 MSRAQ9UJ68 235 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TIMM13Q9Y5L4 95 aaPredicted RBP16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 HAUS5O94927 633 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ARHGEF15O94989 841 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CALB2P22676 271 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 IL4RP24394 825 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TKTP29401 623 aaKnown RBP16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ARFIP2P53365 341 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SNX16P57768 344 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 OVGP1Q12889 678 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CDO1Q16878 200 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TAS1R1Q7RTX1 841 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 METTL23Q86XA0 190 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TRIM42Q8IWZ5 723 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PQLC3Q8N755 202 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KLHL23Q8NBE8 558 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 MCUQ8NE86 351 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 OR6B3Q8NGW1 331 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SAMD11Q96NU1 681 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 FAM111AQ96PZ2 611 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ZNF670Q9BS34 389 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SNX25Q9H3E2 840 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 C12orf65Q9H3J6 166 aaKnown RBP16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 POPDC2Q9HBU9 364 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PCDH18Q9HCL0 1135 aa16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ZC3H7BQ9UGR2 993 aaKnown RBP16.39■□□□□ 0.21
CHRFAM7A-203ENST00000401522 A0A0G2JND7 137 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 COPEO14579 308 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PEX11AO75192 247 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SOD2P04179 222 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 RB1P06400 928 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SNRPAP09012 282 aaKnown RBP16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NEFHP12036 1026 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PRKCHP24723 683 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 EPHB2P29323 1055 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SDC4P31431 198 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SERPINB4P48594 390 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CDK16Q00536 496 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 YWHAHQ04917 246 aaPredicted RBP16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 MRPL58Q14197 206 aaKnown RBP16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 USP41Q3LFD5 358 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ANKRD20A2Q5SQ80 823 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ANKRD20A1Q5TYW2 823 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ANKRD20A3Q5VUR7 823 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 OVOS1Q6IE37 1185 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 OLFML1Q6UWY5 402 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LRRC6Q86X45 466 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CDKL3Q8IVW4 592 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms