RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 FBRSL1Q9HCM7 1045 aaKnown RBP16.45■□□□□ 0.22
HMGA1-204ENST00000401473 CWC15Q9P013 229 aaKnown RBP16.45■□□□□ 0.22
HMGA1-204ENST00000401473 STIM2Q9P246 746 aa16.45■□□□□ 0.22
HMGA1-204ENST00000401473 HOXC11O43248 304 aaPredicted RBP16.44■□□□□ 0.22
HMGA1-204ENST00000401473 ADH1CP00326 375 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 KRT7P08729 469 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 GOT1P17174 413 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 SLC6A11P48066 632 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 PEX5P50542 639 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 GAD2Q05329 585 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 SLC44A4Q53GD3 710 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 MPP7Q5T2T1 576 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 ACBD5Q5T8D3 534 aaPredicted RBP16.44■□□□□ 0.22
HMGA1-204ENST00000401473 RNF43Q68DV7 783 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 ANKS1BQ7Z6G8 1248 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 ETFBKMTQ8IXQ9 262 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 CPA6Q8N4T0 437 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 WFDC5Q8TCV5 224 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 DNASE1L2Q92874 299 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 PCDH18Q9HCL0 1135 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 KCND1Q9NSA2 647 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 NDFIP2Q9NV92 336 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 ZNF212Q9UDV6 495 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 C3orf70A6NLC5 250 aaPredicted RBP16.44■□□□□ 0.22
HMGA1-204ENST00000401473 OPRD1P41143 372 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 PFKPQ01813 784 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 NR1H3Q13133 447 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 MMRN1Q13201 1228 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 FSCBQ5H9T9 825 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
HMGA1-204ENST00000401473 LRRC31Q6UY01 552 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 PEX26Q7Z412 305 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 SYCE1Q8N0S2 351 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 OR52K2Q8NGK3 314 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 EDAQ92838 391 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 PPARGC1AQ9UBK2 798 aaKnown RBP16.44■□□□□ 0.22
HMGA1-204ENST00000401473 FBXO10Q9UK96 956 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 PCDHA3Q9Y5H8 950 aa16.44■□□□□ 0.22
HMGA1-204ENST00000401473 ZDBF2Q9HCK1 2354 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 KRBA1A5PL33 1030 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 PI4K2BG5E9Z4 385 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 CYBBP04839 570 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 CD72P21854 359 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 KDELR1P24390 212 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 EPHB2P29323 1055 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 CTNNA1P35221 906 aaKnown RBP16.43■□□□□ 0.22
HMGA1-204ENST00000401473 CDH6P55285 790 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 RWDD4Q6NW29 188 aaKnown RBP16.43■□□□□ 0.22
HMGA1-204ENST00000401473 KCTD6Q8NC69 237 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 TSC1Q92574 1164 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 ALG3Q92685 438 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 TRIM44Q96DX7 344 aaPredicted RBP16.43■□□□□ 0.22
HMGA1-204ENST00000401473 AMFRQ9UKV5 643 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 PIAS3Q9Y6X2 628 aa16.43■□□□□ 0.22
HMGA1-204ENST00000401473 SPECC1L-ADORA2AF8WAN1 911 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 TNFRSF10AO00220 468 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 CACNG3O60359 315 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 TULP3O75386 442 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 CISD3P0C7P0 127 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 HOXC13P31276 330 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 CTHP32929 405 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 DPYSL3Q14195 570 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 RABGAP1LQ5R372 815 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 TFAP2DQ7Z6R9 452 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 NLRP14Q86W24 1093 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 HJURPQ8NCD3 748 aaPredicted RBP16.42■□□□□ 0.22
HMGA1-204ENST00000401473 TRIM58Q8NG06 486 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 HES6Q96HZ4 224 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 ZYG11BQ9C0D3 744 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 EPHX3Q9H6B9 360 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 WNT16Q9UBV4 365 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 CA14Q9ULX7 337 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 CHD5Q8TDI0 1954 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 DDX3YO15523 660 aaKnown RBP16.42■□□□□ 0.22
HMGA1-204ENST00000401473 HLA-FP30511 346 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 GALK1P51570 392 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 MEI1Q5TIA1 1274 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 RFX8Q6ZV50 586 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 SFTPA1Q8IWL2 248 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 CARNMT1Q8N4J0 409 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 RNF25Q96BH1 459 aaPredicted RBP16.42■□□□□ 0.22
HMGA1-204ENST00000401473 TBC1D31Q96DN5 1066 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 CSPG4P5Q96PW8 444 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 EPAS1Q99814 870 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 ZKSCAN5Q9Y2L8 839 aa16.42■□□□□ 0.22
HMGA1-204ENST00000401473 A0A1B0GVM2 712 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 ANTXRLA6NF34 631 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 TCAF2A6NFQ2 919 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 EEF2KO00418 725 aaKnown RBP16.41■□□□□ 0.22
HMGA1-204ENST00000401473 AMPD1P23109 780 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 CTNNA2P26232 953 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 HCAR3P49019 387 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 CDH4P55283 916 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 TPI1P60174 286 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 LLGL1Q15334 1064 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 ZNF569Q5MCW4 686 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 ZFYVE27Q5T4F4 411 aa16.41■□□□□ 0.22
HMGA1-204ENST00000401473 CXorf57Q6NSI4 855 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms