RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 C5orf67F2Z3F1 127 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 MYO1CO00159 1063 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 LRIG2O94898 1065 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 RHOQP17081 205 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 CCL23P55773 120 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 GPX6P59796 221 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 TPI1P60174 286 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 USP46P62068 366 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PPIGQ13427 754 aaKnown RBP eCLIP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 DNAJC21Q5F1R6 531 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ANKRD20A2Q5SQ80 823 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 TMCO4Q5TGY1 634 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ANKRD20A1Q5TYW2 823 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ANKRD20A3Q5VUR7 823 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ANKRD22Q5VYY1 191 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 NUGGCQ68CJ6 796 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 CAND1Q86VP6 1230 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 TEX26Q8N6G2 289 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 RIN2Q8WYP3 895 aaPredicted RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 HERVK_113Q902F9 699 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PLD4Q96BZ4 506 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 SPG21Q9NZD8 308 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 SENP1Q9P0U3 644 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 RABGEF1Q9UJ41 708 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PRG3Q9Y2Y8 225 aaPredicted RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ZNF106Q9H2Y7 1883 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 H7C0C1 242 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 KCNN4O15554 427 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 CDH16O75309 829 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 STK10O94804 968 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 OR4Q2P0C623 313 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 CSH1P0DML2 217 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 CSH2P0DML3 217 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ATP5OP48047 213 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 MAPKAPK2P49137 400 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PGFP49763 221 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 DYNLT1P63172 113 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 FNBP1LQ5T0N5 605 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ZFYVE27Q5T4F4 411 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 HEATR6Q6AI08 1181 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ALG1LQ6GMV1 187 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 C1orf228Q6PIY5 440 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ADGRD1Q6QNK2 874 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ATP6V0D2Q8N8Y2 350 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ATP11CQ8NB49 1132 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 MZB1Q8WU39 189 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 P2RY11Q96G91 374 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 FAM118BQ9BPY3 351 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 NAT9Q9BTE0 207 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 GBA3Q9H227 469 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PLEKHA4Q9H4M7 779 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 MKS1Q9NXB0 559 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 ABI2Q9NYB9 513 aaPredicted RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 VPS18Q9P253 973 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 XPO7Q9UIA9 1087 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 RRP15Q9Y3B9 282 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 HS3ST4Q9Y661 456 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 MRPL42Q9Y6G3 142 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 TCRBV7S3A2A0A539 114 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PAGE1O75459 146 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 NR1D1P20393 614 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PHBP35232 272 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PPP2R2AP63151 447 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 UBE3AQ05086 875 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 KLHL38Q2WGJ6 581 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PPP6R3Q5H9R7 873 aaPredicted RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 TIGD7Q6NT04 549 aaPredicted RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 LILRA6Q6PI73 481 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 C16orf59Q7L2K0 433 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PDIK1LQ8N165 341 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 VPS52Q8N1B4 723 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 NPWQ8N729 165 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PAWRQ96IZ0 340 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 SIGLEC10Q96LC7 697 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 CCDC77Q9BR77 488 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 MAGEB5Q9BZ81 275 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 YY1AP1Q9H869 796 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 PLAC1Q9HBJ0 212 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 GMIPQ9P107 970 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 RWDD3Q9Y3V2 267 aa7.03□□□□□ -1.28
CX3CR1-202ENST00000399220 GBF1Q92538 1859 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 E9PAM4 449 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 RASGRF2O14827 1237 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 PRPF4O43172 522 aaKnown RBP eCLIP7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 PEX11BO96011 259 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 OAS1P00973 400 aaKnown RBP7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 CTSAP10619 480 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 TCF3P15923 654 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 PTPN3P26045 913 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 NME3Q13232 169 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 TRIP13Q15645 432 aaPredicted RBP7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 MSS51Q4VC12 460 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 SWT1Q5T5J6 900 aaKnown RBP7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 PIK3R6Q5UE93 754 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 ZNF783Q6ZMS7 281 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 CCDC13Q8IYE1 715 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 AGGF1Q8N302 714 aaeCLIP7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 TEKT5Q96M29 485 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 PPP1R12CQ9BZL4 782 aa7.02□□□□□ -1.29
CX3CR1-202ENST00000399220 ETNK1Q9HBU6 452 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms