RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 BBS5Q8N3I7 341 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 C1orf21Q9H246 121 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PSMC3IPQ9P2W1 217 aaPredicted RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PARD3Q8TEW0 1356 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 RPP14O95059 124 aaKnown RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 POLR2CP19387 275 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 RPL4P36578 427 aaKnown RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 CDK7P50613 346 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 FLI1Q01543 452 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 TCIRG1Q13488 830 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 TIGD7Q6NT04 549 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 SMYD4Q8IYR2 804 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 COMMD9Q9P000 198 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 DENND2AQ9ULE3 1009 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 RSL1D1O76021 490 aaKnown RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 CCNE2O96020 404 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 INHBAP08476 426 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 FAM69CQ0P6D2 419 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 RAB30Q15771 203 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 FAM199XQ6PEV8 388 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 AVL9Q8NBF6 648 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 C11orf65Q8NCR3 313 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 SPATA16Q9BXB7 569 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 FUT8Q9BYC5 575 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 ZNF263O14978 683 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 RBM6P78332 1123 aaKnown RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 ZNF699Q32M78 642 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 SPDYE7PQ495Y7 208 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 COLEC12Q5KU26 742 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 MROH7Q68CQ1 1323 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 DHX40Q8IX18 779 aaKnown RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 ZNF416Q9BWM5 594 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 SNTG2Q9NY99 539 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 ADD3Q9UEY8 706 aaKnown RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 JAG2Q9Y219 1238 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 POMT1Q9Y6A1 747 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 IFNA17P01571 189 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 CD19P15391 556 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 EPB42P16452 691 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 MOGQ16653 247 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 TYW3Q6IPR3 259 aaKnown RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 MTFR2Q6P444 385 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 TMCO2Q7Z6W1 182 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 MARVELD2Q8N4S9 558 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 THUMPD3Q9BV44 507 aaKnown RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 CYP26B1Q9NR63 512 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 NRBP2Q9NSY0 501 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 VPS54Q9P1Q0 977 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 STARD13Q9Y3M8 1113 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 CLIC4Q9Y696 253 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 NDUFB9Q9Y6M9 179 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 DYNC1LI2O43237 492 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 GNA14O95837 355 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 MTHFD1P11586 935 aaKnown RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 AKT1P31749 480 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 PLOD1Q02809 727 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-201ENST00000398179 CFAP161Q6P656 301 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 CBWD2Q8IUF1 395 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 LINC00469Q8N7U9 141 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 CSRNP1Q96S65 589 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 PCYT2Q99447 389 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 WDR26Q9H7D7 661 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 SNX24Q9Y343 169 aa13.06□□□□□ -0.32
CCBE1-201ENST00000398179 KHDRBS3O75525 346 aaKnown RBP13.05□□□□□ -0.32
CCBE1-201ENST00000398179 ANXA8P13928 327 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 PPP3CBP16298 524 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 ALDH3B1P43353 468 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 CALCRLQ16602 461 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 ANXA8L1Q5VT79 327 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 KBTBD3Q8NAB2 608 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 C12orf43Q96C57 262 aaKnown RBP13.05□□□□□ -0.32
CCBE1-201ENST00000398179 OR2M4Q96R27 311 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 FAIMQ9NVQ4 179 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 TRPS1Q9UHF7 1281 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 EIF3LQ9Y262 564 aaKnown RBP13.05□□□□□ -0.32
CCBE1-201ENST00000398179 UBE2QL1A1L167 161 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 ARHGEF35A5YM69 484 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 RAD51CO43502 376 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 ALDH1A2O94788 518 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 CDK17Q00537 523 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 CHMP1BQ7LBR1 199 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 KRT25Q7Z3Z0 450 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 SYNPOQ8N3V7 929 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 MREGQ8N565 214 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 MCOLN3Q8TDD5 553 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 AGAP11Q8TF27 550 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 NR4A3Q92570 626 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 KAT2AQ92830 837 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 SLC7A6OSQ96CW6 309 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-201ENST00000398179 PIMREGQ9BSJ6 248 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 ZNF282Q9UDV7 671 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-201ENST00000398179 SPACA6W5XKT8 324 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 PLA2G6O60733 806 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 CYP2E1P05181 493 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-201ENST00000398179 PKLRP30613 574 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 GRK3P35626 688 aa13.05□□□□□ -0.32
CCBE1-201ENST00000398179 SULT2A1Q06520 285 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms