RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 RGS16O15492 202 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 RIPK2O43353 540 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 COCHO43405 550 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 TUBP50607 506 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 SNX1Q13596 522 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 SLC29A2Q14542 456 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 KLHDC10Q6PID8 442 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 ADGRD2Q7Z7M1 963 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 PQLC3Q8N755 202 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 TIFAQ96CG3 184 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 XPO6Q96QU8 1125 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 HAPLN3Q96S86 360 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 OSBPL2Q9H1P3 480 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 OR12D3Q9UGF7 316 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 SNX10Q9Y5X0 201 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 RANBP2P49792 3224 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 CHD7Q9P2D1 2997 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 ZNF638Q14966 1978 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 FAM72CH0Y354 149 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 APOL1O14791 398 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 RFPL2O75678 378 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 MOCS2O96007 188 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 KPNA1P52294 538 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 FAM72AQ5TYM5 149 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 GKAP1Q5VSY0 366 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 FAM72DQ6L9T8 149 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 FAM72BQ86X60 149 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 TMC8Q8IU68 726 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 CACNA2D3Q8IZS8 1091 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 TTC13Q8NBP0 860 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 CHMP6Q96FZ7 201 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 LRRC3Q9BY71 257 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 SAE1Q9UBE0 346 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 CHD9Q3L8U1 2897 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 C2orf78A6NCI8 922 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 APOC4-APOC2K7ER74 178 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 EEF2KO00418 725 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 PAGE1O75459 146 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 APOEP02649 317 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 APOC2P02655 101 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 SHBGP04278 402 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 HMBSP08397 361 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 AMPD1P23109 780 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 GABRR2P28476 465 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 KCNJ1P48048 391 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 SEMA3BQ13214 749 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 SLC9A4Q6AI14 798 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 TAOK1Q7L7X3 1001 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 CORO1BQ9BR76 489 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 SIK2Q9H0K1 926 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 SEMA4AQ9H3S1 761 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 TLE6Q9H808 572 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 DPP7Q9UHL4 492 aa19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 HBS1LQ9Y450 684 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-204ENST00000397760 OAS1P00973 400 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 ACTN3Q08043 901 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 PPP1R7Q15435 360 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 CCDC121Q6ZUS5 278 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 RFX8Q6ZV50 586 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 GAREM2Q75VX8 874 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 PLD5Q8N7P1 536 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 ACTL9Q8TC94 416 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 SEC16BQ96JE7 1060 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 EPAS1Q99814 870 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 RNF38Q9H0F5 515 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 TRPC7Q9HCX4 862 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 ASAH2Q9NR71 780 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 XPO7Q9UIA9 1087 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 HCFC2Q9Y5Z7 792 aa19.91■□□□□ 0.78
PDLIM2-204ENST00000397760 RFXAPO00287 272 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 LIASO43766 372 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 IGLV3-27P01718 113 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 ZFXP17010 805 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 DRD4P21917 467 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 HOXA9P31269 272 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 ZNF135P52742 658 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 TPI1P60174 286 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 SMAD3P84022 425 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 OTUD4Q01804 1114 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 RING1Q06587 406 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 PTK6Q13882 451 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 C1orf228Q6PIY5 440 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 NPNTQ6UXI9 565 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 ATP6V0D2Q8N8Y2 350 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 CABS1Q96KC9 395 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 ARHGEF4Q9NR80 690 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 RASGRF2O14827 1237 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 LRIG2O94898 1065 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 GAS8O95995 478 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 MYL4P12829 197 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 PECAM1P16284 738 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 TGM2P21980 687 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 ATP5DP30049 168 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 CDC25CP30307 473 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 NRIP1P48552 1158 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 HCAR3P49019 387 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 COG7P83436 770 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 IFT88Q13099 833 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 DPYSQ14117 519 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 LACTB2Q53H82 288 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms