RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 CYP39A1Q9NYL5 469 aa7.05□□□□□ -1.28
SMCO1-201ENST00000397537 ZNF70Q9UC06 446 aaPredicted RBP7.05□□□□□ -1.28
SMCO1-201ENST00000397537 GRID1Q9ULK0 1009 aa7.05□□□□□ -1.28
SMCO1-201ENST00000397537 XRN1Q8IZH2 1706 aaKnown RBP7.05□□□□□ -1.28
SMCO1-201ENST00000397537 PTPN23Q9H3S7 1636 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 MYO5BQ9ULV0 1848 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CTAGE15A4D2H0 777 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 H0YCG3 227 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CTDSP2O14595 271 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 GUCY1B2O75343 617 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 RASSF9O75901 435 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CTAGE8P0CG41 777 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 PRG2P13727 222 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 HOXA10P31260 410 aaPredicted RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 PITPNBP48739 271 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 TEKQ02763 1124 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 PRKCZQ05513 592 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 GABPB1Q06547 395 aaPredicted RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SCN1BQ07699 218 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SNX1Q13596 522 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CLCA4Q14CN2 919 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 LIPMQ5VYY2 423 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CTAGE6Q86UF2 777 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CTAGE4Q8IX94 777 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 YAF2Q8IY57 180 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 HIPK4Q8NE63 616 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 ZCCHC10Q8TBK6 192 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SLC13A3Q8WWT9 602 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 DTNBP1Q96EV8 351 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 ZDHHC12Q96GR4 267 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 RBM17Q96I25 401 aaKnown RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 MED15Q96RN5 788 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 GCOM2Q9BZD3 368 aaPredicted RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 NYXQ9GZU5 481 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 IQCGQ9H095 443 aaKnown RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 EPB41L1Q9H4G0 881 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 MTG2Q9H4K7 406 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 STN1Q9H668 368 aaKnown RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 KAT14Q9H8E8 782 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 MAGEE1Q9HCI5 957 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SLC6A20Q9NP91 592 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 RIC8BQ9NVN3 520 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CNIH4Q9P003 139 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CNTN6Q9UQ52 1028 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 KCNK7Q9Y2U2 307 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 AATKQ6ZMQ8 1374 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 PXDNQ92626 1479 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 WDR19Q8NEZ3 1342 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 USP32Q8NFA0 1604 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 PLCH1Q4KWH8 1693 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 MAP3K5Q99683 1374 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SYCE3A1L190 88 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 TTC24A2A3L6 582 aaPredicted RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 KPNA7A9QM74 516 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 BTBD18B2RXH4 712 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 FGF10O15520 208 aaPredicted RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 RECQL5O94762 991 aaPredicted RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 MPOP05164 745 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 EIF2S1P05198 315 aaKnown RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 ASGR1P07306 291 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 TSPY4P0CV99 314 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 TSPY10P0CW01 314 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 KRT4P19013 534 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 GJA4P35212 333 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 PRKCIP41743 596 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 ETV1P50549 477 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 RIPK4P57078 832 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 KRT17Q04695 432 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 RIPK1Q13546 671 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SNTB1Q13884 538 aaKnown RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CRYMQ14894 314 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 LEXMQ3ZCV2 418 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 FILIP1LQ4L180 1135 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SLFN12LQ6IEE8 588 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CENPPQ6IPU0 288 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 FAM129CQ86XR2 697 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 IRF2BP1Q8IU81 584 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 ZGPATQ8N5A5 531 aaKnown RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 GPR156Q8NFN8 814 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 NEK11Q8NG66 645 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SUN5Q8TC36 379 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 Q96M66 194 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 WNT5BQ9H1J7 359 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 CLSTN2Q9H4D0 955 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 PLEKHA2Q9HB19 425 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SSU72Q9NP77 194 aaKnown RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 TRPV5Q9NQA5 729 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 MBNL1Q9NR56 388 aaKnown RBP7.04□□□□□ -1.28
SMCO1-201ENST00000397537 ABCB8Q9NUT2 735 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 USP40Q9NVE5 1235 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SOHLH2Q9NX45 425 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 COX16Q9P0S2 106 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 SLC30A1Q9Y6M5 507 aa7.04□□□□□ -1.28
SMCO1-201ENST00000397537 NALCNQ8IZF0 1738 aa7.03□□□□□ -1.28
SMCO1-201ENST00000397537 CNTNAP4Q9C0A0 1308 aa7.03□□□□□ -1.28
SMCO1-201ENST00000397537 FAM237BA0A1B0GVD1 139 aa7.03□□□□□ -1.28
SMCO1-201ENST00000397537 RAB27BO00194 218 aa7.03□□□□□ -1.28
SMCO1-201ENST00000397537 PRPF4O43172 522 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMCO1-201ENST00000397537 ONECUT2O95948 504 aa7.03□□□□□ -1.28
SMCO1-201ENST00000397537 HMGCRP04035 888 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms