RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 GOLGA8OA6NCC3 632 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 MEI4A8MW99 385 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 GOLGA8NF8WBI6 632 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 GLRA3O75311 464 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 DGKIO75912 1065 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 ART3Q13508 389 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 RIPK1Q13546 671 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 POU6F1Q14863 301 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 ALYREFQ86V81 257 aaKnown RBP10.8□□□□□ -0.68
CALD1-203ENST00000393118 LRRC52Q8N7C0 313 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 P2RY11Q96G91 374 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 DCLRE1BQ9H816 532 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 TMPRSS4Q9NRS4 437 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 SLC17A6Q9P2U8 582 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 CNTN6Q9UQ52 1028 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 ARFGEF1Q9Y6D6 1849 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 TPP1O14773 563 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 LIN7AO14910 233 aaPredicted RBP10.8□□□□□ -0.68
CALD1-203ENST00000393118 CSPG5O95196 566 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 MGAT5Q09328 741 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 MED21Q13503 144 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 HIC1Q14526 733 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 SNX17Q15036 470 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 SOWAHAQ2M3V2 549 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 UNC5BQ8IZJ1 945 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 UCMAQ8WVF2 138 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 WDR60Q8WVS4 1066 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 WNT8BQ93098 351 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 KCTD15Q96SI1 283 aaPredicted RBP10.8□□□□□ -0.68
CALD1-203ENST00000393118 CCDC134Q9H6E4 229 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 LRRC40Q9H9A6 602 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 POPDC2Q9HBU9 364 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 UBAP1Q9NZ09 502 aa10.8□□□□□ -0.68
CALD1-203ENST00000393118 AIM2O14862 343 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 MFSD11O43934 449 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 HNRNPCL1O60812 293 aaKnown RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 PGK1P00558 417 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 NOS2P35228 1153 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 MATKP42679 507 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 HDAC4P56524 1084 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 CDK16Q00536 496 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 ZBTB17Q13105 803 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 TDRPQ86YL5 185 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 SHCBP1Q8NEM2 672 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 TMEM174Q8WUU8 243 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 HDAC11Q96DB2 347 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 MAML3Q96JK9 1138 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 HSFY1Q96LI6 401 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 TKTL2Q9H0I9 626 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 CCDC68Q9H2F9 335 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 DMAP1Q9NPF5 467 aaPredicted RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 E9PBE3 544 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 GIPC1O14908 333 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 KLHL41O60662 606 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 F7P08709 466 aaPredicted RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 RALBP11234 206 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 YBX3P16989 372 aaKnown RBP eCLIP10.79□□□□□ -0.68
CALD1-203ENST00000393118 ERCC2P18074 760 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 FSCN1Q16658 493 aaKnown RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 CCDC142Q17RM4 750 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 RABGAP1LQ5R372 815 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 NR1H4Q96RI1 486 aaPredicted RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 CLIC5Q9NZA1 410 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 MID2Q9UJV3 735 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 SLC12A4Q9UP95 1085 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 IPPQ9Y573 584 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 ZNF831Q5JPB2 1677 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 LTBP3Q9NS15 1303 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 CXorf49A8MYA2 514 aaPredicted RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 TRDMT1O14717 391 aaKnown RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 LYPLA1O75608 230 aaPredicted RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 SFSWAPQ12872 951 aaKnown RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 SPOUT1Q5T280 376 aaKnown RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 IZUMO2Q6UXV1 221 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 CLNKQ7Z7G1 428 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 CMC1Q7Z7K0 106 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 TNS4Q8IZW8 715 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 MPP5Q8N3R9 675 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.79□□□□□ -0.68
CALD1-203ENST00000393118 SPON2Q9BUD6 331 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 ACSS2Q9NR19 701 aa10.79□□□□□ -0.68
CALD1-203ENST00000393118 TMA7Q9Y2S6 64 aaKnown RBP10.79□□□□□ -0.68
CALD1-203ENST00000393118 MYO18AQ92614 2054 aaKnown RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 PMLP29590 882 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 CDH5P33151 784 aaPredicted RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 ETFBP38117 255 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 CCNFP41002 786 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 ADARP55265 1226 aaKnown RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 PRAMEP78395 509 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 MPP3Q13368 585 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 KPNB1Q14974 876 aaKnown RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 FSCBQ5H9T9 825 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 MIB1Q86YT6 1006 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 ARFGAP1Q8N6T3 406 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 TRIML2Q8N7C3 387 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 PDCD6IPQ8WUM4 868 aaKnown RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 FAM136AQ96C01 138 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 VPS39Q96JC1 886 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 BTBD10Q9BSF8 475 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 SP110Q9HB58 689 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms