RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 SYNJ2BP-COX16A0A087WUM0 186 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 IQANK1A0A1B0GTG1 560 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 A6NHS1 94 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 APOC4-APOC2K7ER74 178 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 CCDC22O60826 627 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 APOC2P02655 101 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 ATP6V1C1P21283 382 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 CYP2F1P24903 491 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 ETV4P43268 484 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 PSEN1P49768 467 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 MRPS5P82675 430 aaKnown RBP20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 IFRD2Q12894 506 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 FAM91A1Q658Y4 838 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 FAM43BQ6ZT52 329 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 STKLD1Q8NE28 680 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 CMASQ8NFW8 434 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 PGLYRP2Q96PD5 576 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 GPATCH2LQ9NWQ4 482 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 COX16Q9P0S2 106 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 SLC17A7Q9P2U7 560 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 XPO7Q9UIA9 1087 aaKnown RBP20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 MTO1Q9Y2Z2 717 aaKnown RBP20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 CDH23Q9H251 3354 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 ZBBXA8MT70 800 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 TMEM189-UBE2V1I3L0A0 370 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 SPAG6O75602 509 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 HAUS5O94927 633 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 GALTP07902 379 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 ARPP19P56211 112 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 DYNLT1P63172 113 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 ACAP1Q15027 740 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 DCAF6Q58WW2 860 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 VARS2Q5ST30 1063 aaKnown RBP20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 C4orf50Q6ZRC1 276 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 SH2D5Q6ZV89 423 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 TAS1R1Q7RTX1 841 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 UNC45BQ8IWX7 931 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 DEFB106AQ8N104 65 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 KCTD6Q8NC69 237 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 KCTD13Q8WZ19 329 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 SKA1Q96BD8 255 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 APOPT1Q96IL0 206 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 MIPEPQ99797 713 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 HTATIP2Q9BUP3 242 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 TSSK1BQ9BXA7 367 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 CXXC1Q9P0U4 656 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 SAE1Q9UBE0 346 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 NUMBLQ9Y6R0 609 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 COL4A6Q14031 1691 aa20.46■□□□□ 0.87
CSNK1D-203ENST00000392334 TCRBV7S3A2A0A539 114 aa20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 HOXA2O43364 376 aa20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 MT-ND3P03897 115 aa20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 PITX1P78337 314 aaPredicted RBP20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 PPIGQ13427 754 aaKnown RBP eCLIP20.45■□□□□ 0.865e-8■■□□□ 13.2
CSNK1D-203ENST00000392334 KRT72Q14CN4 511 aa20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 BBS9Q3SYG4 887 aa20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 SPATA2LQ8IUW3 424 aaPredicted RBP20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 BCL7CQ8WUZ0 217 aaPredicted RBP20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 SLC44A1Q8WWI5 657 aa20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 BTBD10Q9BSF8 475 aa20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 PNPLA8Q9NP80 782 aa20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 ABI2Q9NYB9 513 aaPredicted RBP20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 TSC2P49815 1807 aa20.45■□□□□ 0.86
CSNK1D-203ENST00000392334 ARHGEF37A1IGU5 675 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 YJEFN3A6XGL0 299 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 HHLA1C9JL84 531 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 PRPSAP2O60256 369 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 FGBP02675 491 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 AMHP03971 560 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 ACADSP16219 412 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 PAX3P23760 479 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 HDAC4P56524 1084 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 CDK16Q00536 496 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 DPYSL3Q14195 570 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 PRKD1Q15139 912 aaPredicted RBP20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 EFHC1Q5JVL4 640 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 SYPL2Q5VXT5 272 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 CAPRIN2Q6IMN6 1127 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 CYP4V2Q6ZWL3 525 aaPredicted RBP20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 NSL1Q96IY1 281 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 COLEC11Q9BWP8 271 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 CALN1Q9BXU9 219 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 CADM1Q9BY67 442 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 MAGEB5Q9BZ81 275 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.44■□□□□ 0.862e-12■■■■■ 34.1
CSNK1D-203ENST00000392334 KLF11O14901 512 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 LPXNO60711 386 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 OAZ2O95190 189 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 PCK1P35558 622 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 GRIK1P39086 918 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 ARFIP2P53365 341 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 EIF3EP60228 445 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 YWHAZP63104 245 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 CTXN3Q4LDR2 81 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 TMEM240Q5SV17 173 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 SCAMP5Q8TAC9 235 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 TTC8Q8TAM2 541 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 SPATA18Q8TC71 538 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 PTPRN2Q92932 1015 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms