RNA–Protein interactions for RNA: ENST00000382671.8

PSMD13-202, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,489 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-202ENST00000382671 DDX3XO00571 662 aaKnown RBP eCLIP16.32■□□□□ 0.29e-25■■■■□ 25.1
PSMD13-202ENST00000382671 LUC7L3O95232 432 aaKnown RBP16.32■□□□□ 0.2
PSMD13-202ENST00000382671 GJB6O95452 261 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 HOXB2P14652 356 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 CD70P32970 193 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 RFC1P35251 1148 aaPredicted RBP16.32■□□□□ 0.2
PSMD13-202ENST00000382671 WASP42768 502 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 ATXN1P54253 815 aaKnown RBP16.32■□□□□ 0.2
PSMD13-202ENST00000382671 AUHQ13825 339 aaKnown RBP16.32■□□□□ 0.2
PSMD13-202ENST00000382671 CCDC14Q49A88 953 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 ACBD5Q5T8D3 534 aaPredicted RBP16.32■□□□□ 0.2
PSMD13-202ENST00000382671 FBXL22Q6P050 247 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 DNAJC24Q6P3W2 148 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 CHST9Q7L1S5 443 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 ADIPOR2Q86V24 386 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 CARNMT1Q8N4J0 409 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 GAB3Q8WWW8 586 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 CENPIQ92674 756 aaPredicted RBP16.32■□□□□ 0.2
PSMD13-202ENST00000382671 CIPCQ9C0C6 399 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 GRPEL1Q9HAV7 217 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 CD248Q9HCU0 757 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 ANLNQ9NQW6 1124 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 CACNA2D2Q9NY47 1150 aa16.32■□□□□ 0.2
PSMD13-202ENST00000382671 NYNRINQ9P2P1 1898 aaKnown RBP16.32■□□□□ 0.2
PSMD13-202ENST00000382671 A0A1B0GVM2 712 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 A0A1W2PQF6 199 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 TCAF2A6NFQ2 919 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 TMCO5BA8MYB1 307 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 AP5Z1O43299 807 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 CASP14P31944 242 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 ATP11AP98196 1134 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 LMAN2Q12907 356 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 CDH18Q13634 790 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 C15orf59Q2T9L4 293 aaPredicted RBP16.31■□□□□ 0.2
PSMD13-202ENST00000382671 C5orf22Q49AR2 442 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 PPP1R15BQ5SWA1 713 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 MBLAC2Q68D91 279 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 SPECC1LQ69YQ0 1117 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 ANO7Q6IWH7 933 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 STRADAQ7RTN6 431 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 MDGA1Q8NFP4 955 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 NUP205Q92621 2012 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 C1orf74Q96LT6 269 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 HAPLN3Q96S86 360 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 SIK2Q9H0K1 926 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 SMG5Q9UPR3 1016 aaKnown RBP16.31■□□□□ 0.2
PSMD13-202ENST00000382671 STON1Q9Y6Q2 735 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 CHD5Q8TDI0 1954 aa16.31■□□□□ 0.2
PSMD13-202ENST00000382671 TCRBV21S2A2A0A5A6 115 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 WASH3PC4AMC7 463 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 H0Y626 953 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 RTN2O75298 545 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 RPP40O75818 363 aaKnown RBP16.3■□□□□ 0.2
PSMD13-202ENST00000382671 SERPING1P05155 500 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 POLR2EP19388 210 aaKnown RBP16.3■□□□□ 0.2
PSMD13-202ENST00000382671 GPD1P21695 349 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 RRM1P23921 792 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 IL12RB1P42701 662 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 SRSF5Q13243 272 aaKnown RBP16.3■□□□□ 0.2
PSMD13-202ENST00000382671 TRIM14Q14142 442 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 SIM2Q14190 667 aaPredicted RBP16.3■□□□□ 0.2
PSMD13-202ENST00000382671 ZNF234Q14588 700 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 CDO1Q16878 200 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 TDRD12Q587J7 1177 aaKnown RBP16.3■□□□□ 0.2
PSMD13-202ENST00000382671 FSCBQ5H9T9 825 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 C14orf80Q86SX3 495 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 FAM131BQ86XD5 332 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 CCAR2Q8N163 923 aaKnown RBP16.3■□□□□ 0.2
PSMD13-202ENST00000382671 SORCS1Q8WY21 1168 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 IGSF8Q969P0 613 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 RPRD1AQ96P16 312 aaPredicted RBP16.3■□□□□ 0.2
PSMD13-202ENST00000382671 KIAA1522Q9P206 1035 aaPredicted RBP16.3■□□□□ 0.2
PSMD13-202ENST00000382671 VANGL2Q9ULK5 521 aa16.3■□□□□ 0.2
PSMD13-202ENST00000382671 ANKRD62A6NC57 917 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 FTLP02792 175 aaPredicted RBP16.29■□□□□ 0.2
PSMD13-202ENST00000382671 ATP5BP06576 529 aaKnown RBP16.29■□□□□ 0.2
PSMD13-202ENST00000382671 DLDP09622 509 aaKnown RBP16.29■□□□□ 0.2
PSMD13-202ENST00000382671 HNRNPH3P31942 346 aaKnown RBP16.29■□□□□ 0.2
PSMD13-202ENST00000382671 GGCXP38435 758 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 ZNF143P52747 638 aaPredicted RBP16.29■□□□□ 0.2
PSMD13-202ENST00000382671 RPL7AP62424 266 aaKnown RBP16.29■□□□□ 0.2
PSMD13-202ENST00000382671 SLC12A1Q13621 1099 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 FUT11Q495W5 492 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 RAB6CQ53S08 254 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 SH3PXD2AQ5TCZ1 1133 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 PLEKHA7Q6IQ23 1121 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 VPS36Q86VN1 386 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 CIR1Q86X95 450 aaPredicted RBP16.29■□□□□ 0.2
PSMD13-202ENST00000382671 VSTM4Q8IW00 320 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 ZNF683Q8IZ20 524 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 HMGB4Q8WW32 186 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 TTC17Q96AE7 1141 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 MCEEQ96PE7 176 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 RAB6CQ9H0N0 254 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 ISCUQ9H1K1 167 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 TMPRSS4Q9NRS4 437 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 INTS6Q9UL03 887 aaKnown RBP16.29■□□□□ 0.2
PSMD13-202ENST00000382671 RAB23Q9ULC3 237 aa16.29■□□□□ 0.2
PSMD13-202ENST00000382671 PLA2G4CQ9UP65 541 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms