RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 UBIAD1Q9Y5Z9 338 aa15.21■□□□□ 0.02
SNPH-202ENST00000381873 XPO1O14980 1071 aaKnown RBP15.2■□□□□ 0.02
SNPH-202ENST00000381873 OR56A5P0C7T3 313 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 CRABP2P29373 138 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 CYP2C18P33260 490 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 MLH1P40692 756 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 ITIH4Q14624 930 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 RRP1BQ14684 758 aaKnown RBP15.2■□□□□ 0.02
SNPH-202ENST00000381873 PCBP1Q15365 356 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNPH-202ENST00000381873 ZNF558Q96NG5 402 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 KCPQ6ZWJ8 1503 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 A0A096LPK6 155 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 PSMD12O00232 456 aaPredicted RBP15.2■□□□□ 0.02
SNPH-202ENST00000381873 BAIAP3O94812 1187 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 PGAM1P18669 254 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 N4BP2L1Q5TBK1 243 aaPredicted RBP15.2■□□□□ 0.02
SNPH-202ENST00000381873 TDRD5Q8NAT2 981 aaKnown RBP15.2■□□□□ 0.02
SNPH-202ENST00000381873 NMRAL1Q9HBL8 299 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 USE1Q9NZ43 259 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 TRPC4Q9UBN4 977 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 TISP43B9A030 160 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 MEIS2O14770 477 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 SLC2A4P14672 509 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 PPP2R1BP30154 601 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 SSTR1P30872 391 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 GRIK5Q16478 980 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 GLT6D1Q7Z4J2 308 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 SUSD6Q92537 303 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 DPY30Q9C005 99 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 POLR1EQ9GZS1 481 aaKnown RBP15.2■□□□□ 0.02
SNPH-202ENST00000381873 PRDM16Q9HAZ2 1276 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 MRPL17Q9NRX2 175 aaKnown RBP15.2■□□□□ 0.02
SNPH-202ENST00000381873 KLHL28Q9NXS3 571 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 SNX13Q9Y5W8 968 aa15.2■□□□□ 0.02
SNPH-202ENST00000381873 GTF2BQ00403 316 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 RASA2Q15283 850 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 SPANXN3Q5MJ09 141 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 CCDC81Q6ZN84 652 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 SKA1Q96BD8 255 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 KRCC1Q9NPI7 259 aaPredicted RBP15.19■□□□□ 0.02
SNPH-202ENST00000381873 SH3BP4Q9P0V3 963 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 DNPEPQ9ULA0 475 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 NCKAP1Q9Y2A7 1128 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 F8VP50 259 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 SLC9A3R1O14745 358 aaPredicted RBP15.19■□□□□ 0.02
SNPH-202ENST00000381873 STAU1O95793 577 aaKnown RBP15.19■□□□□ 0.02
SNPH-202ENST00000381873 TRUB2O95900 331 aaKnown RBP15.19■□□□□ 0.02
SNPH-202ENST00000381873 CYP2A6P11509 494 aaPredicted RBP15.19■□□□□ 0.02
SNPH-202ENST00000381873 CALB2P22676 271 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 MMP13P45452 471 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 MAP2K5Q13163 448 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 KHDRBS2Q5VWX1 349 aaKnown RBP15.19■□□□□ 0.02
SNPH-202ENST00000381873 CCDC149Q6ZUS6 474 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 CYP4Z1Q86W10 505 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 SCUBE1Q8IWY4 988 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 CAVIN3Q969G5 261 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 SLC40A1Q9NP59 571 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 TCF7L2Q9NQB0 619 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 WDR27A2RRH5 827 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 WTIPA6NIX2 430 aaPredicted RBP15.19■□□□□ 0.02
SNPH-202ENST00000381873 UBXN8O00124 270 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 SERPINE1P05121 402 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 SERPINA4P29622 427 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 MIER2Q8N344 545 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 UNKQ9C0B0 810 aaKnown RBP15.19■□□□□ 0.02
SNPH-202ENST00000381873 CES2O00748 559 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 GSTM1P09488 218 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 POU1F1P28069 291 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 NOGQ13253 232 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 ACOX1Q15067 660 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 RCN1Q15293 331 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 DEFB115Q30KQ5 88 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 CCDC153Q494R4 210 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 PRAMEF19Q5SWL8 479 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 TMEM154Q6P9G4 183 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 PALB2Q86YC2 1186 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 METTL6Q8TCB7 284 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 EPS8L1Q8TE68 723 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 SLC24A3Q9HC58 644 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 PIH1D1Q9NWS0 290 aaKnown RBP15.19■□□□□ 0.02
SNPH-202ENST00000381873 SPG21Q9NZD8 308 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 OR12D3Q9UGF7 316 aa15.19■□□□□ 0.02
SNPH-202ENST00000381873 LRRC10BA6NIK2 292 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 ZNF682O95780 498 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 PRKAA2P54646 552 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
SNPH-202ENST00000381873 CSGALNACT1Q8TDX6 532 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 HAS1Q92839 578 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 SERAC1Q96JX3 654 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 HES2Q9Y543 173 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 SF3B1O75533 1304 aaKnown RBP eCLIP15.18■□□□□ 0.026e-10■■■■■ 187.2
SNPH-202ENST00000381873 TBC1D3BA6NDS4 549 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 RIPK2O43353 540 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 KIF1CO43896 1103 aaKnown RBP15.18■□□□□ 0.02
SNPH-202ENST00000381873 MAFO75444 373 aaPredicted RBP15.18■□□□□ 0.02
SNPH-202ENST00000381873 ACADSP16219 412 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 NPR3P17342 541 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 POLR2EP19388 210 aaKnown RBP15.18■□□□□ 0.02
SNPH-202ENST00000381873 RBL1P28749 1068 aa15.18■□□□□ 0.02
SNPH-202ENST00000381873 MRPS15P82914 257 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms