RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 USP39Q53GS9 565 aaKnown RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 NT5DC1Q5TFE4 455 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 ARMC6Q6NXE6 501 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 DYTNA2CJ06 578 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 FBXO21O94952 628 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 ATG7O95352 703 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 MAGEA10P43363 369 aaPredicted RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 CSE1LP55060 971 aaKnown RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 MAP2K5Q13163 448 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 CRELD2Q6UXH1 353 aaPredicted RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 ENKURQ8TC29 256 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 MRPL48Q96GC5 212 aaKnown RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 L3MBTL3Q96JM7 780 aaPredicted RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 MRPL9Q9BYD2 267 aaKnown RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 TMEM134Q9H6X4 195 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 GPATCH2LQ9NWQ4 482 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 DUSP12Q9UNI6 340 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 PDE9AO76083 593 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 TPBGLP0DKB5 382 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 ALOX12P18054 663 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 SLC20A2Q08357 652 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 TRAF3Q13114 568 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 TBX2Q13207 712 aaPredicted RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 FSCN1Q16658 493 aaKnown RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 CELF3Q5SZQ8 465 aaKnown RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 OTUD3Q5T2D3 398 aaPredicted RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 SLFN11Q7Z7L1 901 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 CDH24Q86UP0 819 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 FAM45AQ8TCE6 357 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 DLG3Q92796 817 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 CPSF4O95639 269 aaKnown RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 DEFB115Q30KQ5 88 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 SPANXN2Q5MJ10 180 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 DHRSXQ8N5I4 330 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 MSL3Q8N5Y2 521 aaKnown RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 ACTL9Q8TC94 416 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 C1orf50Q9BV19 199 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 TLR10Q9BXR5 811 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 PRDM4Q9UKN5 801 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 KLHL20Q9Y2M5 609 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 TRPV2Q9Y5S1 764 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 ACKR2O00590 384 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 AHCYL1O43865 530 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 THP07101 528 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 ELK3P41970 407 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 FASTKQ14296 549 aaKnown RBP14.27□□□□□ -0.12
SNPH-201ENST00000381867 GRTP1Q5TC63 336 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 EIF1ADQ8N9N8 165 aaKnown RBP14.27□□□□□ -0.12
SNPH-201ENST00000381867 YME1L1Q96TA2 773 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 GRIP2Q9C0E4 1043 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 DMAP1Q9NPF5 467 aaPredicted RBP14.27□□□□□ -0.12
SNPH-201ENST00000381867 GGA2Q9UJY4 613 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 MRASO14807 208 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 INPP4BO15327 924 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 F9P00740 461 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 KRT6BP04259 564 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 GSTT1P30711 240 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 KRT6CP48668 564 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 TYW3Q6IPR3 259 aaKnown RBP14.27□□□□□ -0.12
SNPH-201ENST00000381867 SLC27A1Q6PCB7 646 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 SLC47A2Q86VL8 602 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 CYP4Z2PQ8N1L4 340 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 BHMTQ93088 406 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 AP4E1Q9UPM8 1137 aa14.27□□□□□ -0.12
SNPH-201ENST00000381867 SNHG28P0DPA3 235 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 LY6KQ17RY6 165 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 PLPPR4Q7Z2D5 763 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 C11orf96Q7Z7L8 435 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 POU5F2Q8N7G0 328 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 WDR60Q8WVS4 1066 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 GPRC5CQ9NQ84 441 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 ARMCX1Q9P291 453 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 NDUFAF1Q9Y375 327 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 DLG5Q8TDM6 1919 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 FAM237AA0A1B0GTK4 181 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 MAGEB16A2A368 324 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 GP5P40197 560 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 SKIV2L2P42285 1042 aaKnown RBP14.27□□□□□ -0.13
SNPH-201ENST00000381867 CHN2P52757 468 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 TTMPQ5BVD1 217 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 TSEN2Q8NCE0 465 aaKnown RBP14.27□□□□□ -0.13
SNPH-201ENST00000381867 AGAP11Q8TF27 550 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 FIG4Q92562 907 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 PNMA5Q96PV4 448 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 FICDQ9BVA6 458 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 CASZ1Q86V15 1759 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 SPEF2Q9C093 1822 aa14.27□□□□□ -0.13
SNPH-201ENST00000381867 KLRG2A4D1S0 409 aaPredicted RBP14.26□□□□□ -0.13
SNPH-201ENST00000381867 YY1P25490 414 aa14.26□□□□□ -0.13
SNPH-201ENST00000381867 TTKP33981 857 aa14.26□□□□□ -0.13
SNPH-201ENST00000381867 CDH18Q13634 790 aa14.26□□□□□ -0.13
SNPH-201ENST00000381867 NFIL3Q16649 462 aa14.26□□□□□ -0.13
SNPH-201ENST00000381867 DGKKQ5KSL6 1271 aa14.26□□□□□ -0.13
SNPH-201ENST00000381867 TSPAN18Q96SJ8 248 aa14.26□□□□□ -0.13
SNPH-201ENST00000381867 AVENQ9NQS1 362 aaPredicted RBP14.26□□□□□ -0.13
SNPH-201ENST00000381867 ARHGEF3Q9NR81 526 aa14.26□□□□□ -0.13
SNPH-201ENST00000381867 KCNK4Q9NYG8 393 aa14.26□□□□□ -0.13
SNPH-201ENST00000381867 NRCAMQ92823 1304 aa14.26□□□□□ -0.13
SNPH-201ENST00000381867 NFE2Q16621 373 aaPredicted RBP14.26□□□□□ -0.13
SNPH-201ENST00000381867 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms