RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 NDUFA13Q9P0J0 144 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 TMEM233B4DJY2 109 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 CASQ2O14958 399 aaPredicted RBP13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 DENRO43583 198 aaKnown RBP13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 MT-CO1P00395 513 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 CXCL8P10145 99 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 NAA20P61599 178 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 TFDP2Q14188 446 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 TAZQ16635 292 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 SLFN12LQ6IEE8 588 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 BNC2Q6ZN30 1099 aaPredicted RBP13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 NIPA1Q7RTP0 329 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 NLRP7Q8WX94 980 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 LRTOMTQ8WZ04 291 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 ACO2Q99798 780 aaKnown RBP13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 CIB1Q99828 191 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 SNRNP25Q9BV90 132 aaKnown RBP13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 TMPRSS4Q9NRS4 437 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 RIMS3Q9UJD0 308 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 BLOC1S6Q9UL45 172 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 CLEC11AQ9Y240 323 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 EFR3BQ9Y2G0 817 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 BPTFQ12830 3046 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 XPOTO43592 962 aaKnown RBP13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 GLRA3O75311 464 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 TSHRP16473 764 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 NUP93Q8N1F7 819 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 KYQ8NBH2 561 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 ARMC7Q9H6L4 198 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 PCDH18Q9HCL0 1135 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 EPS15L1Q9UBC2 864 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 EBF1Q9UH73 591 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 RNF11Q9Y3C5 154 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 SNX13Q9Y5W8 968 aa13.82□□□□□ -0.2
EIF3CL-201ENST00000380876 SLX4Q8IY92 1834 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 ARHGAP10A1A4S6 786 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 LDHAP00338 332 aaKnown RBP13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 MMP10P09238 476 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 CKMT2P17540 419 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 PSMC3P17980 439 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 NDST2P52849 883 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 EN1Q05925 392 aaPredicted RBP13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 ART3Q13508 389 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 LSM12Q3MHD2 195 aaKnown RBP13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 PITRM1Q5JRX3 1037 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 TP53INP2Q8IXH6 220 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 SLC29A1Q99808 456 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 TMEM79Q9BSE2 394 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 ZNF518BQ9C0D4 1074 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 SUDS3Q9H7L9 328 aaPredicted RBP13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 SYBUQ9NX95 663 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 STK39Q9UEW8 545 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 MRPL42Q9Y6G3 142 aaKnown RBP13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 CYP2F1P24903 491 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 ALDH1B1P30837 517 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 MTX3Q5HYI7 312 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 CLVS1Q8IUQ0 354 aaPredicted RBP13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 BRSK2Q8IWQ3 736 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 DCLK2Q8N568 766 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 SLC4A11Q8NBS3 891 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 RNF149Q8NC42 400 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 KBTBD7Q8WVZ9 684 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 PPWD1Q96BP3 646 aaKnown RBP13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 SGF29Q96ES7 293 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 XYLT2Q9H1B5 865 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 PORCNQ9H237 461 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 SNX15Q9NRS6 342 aa13.81□□□□□ -0.2
EIF3CL-201ENST00000380876 PAPSS1O43252 624 aaPredicted RBP13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 CLIC3O95833 236 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 ITGB3P05106 788 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 CCDC166P0CW27 439 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 EPHX2P34913 555 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 PTPN11Q06124 597 aaPredicted RBP13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 ITGA7Q13683 1181 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 CCDC14Q49A88 953 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 ZNF667Q5HYK9 610 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 EEF1DP3Q658K8 133 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 MAP1SQ66K74 1059 aaPredicted RBP13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 KRT80Q6KB66 452 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 ZNF554Q86TJ5 538 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 TRIM50Q86XT4 487 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 NLRP4Q96MN2 994 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 CDH19Q9H159 772 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 WDR41Q9HAD4 459 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 ZNF302Q9NR11 478 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 C6orf203Q9P0P8 240 aaPredicted RBP13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 RSL24D1Q9UHA3 163 aaKnown RBP13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 SFMBT1Q9UHJ3 866 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 PCDHGC3Q9UN70 934 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 SORCS3Q9UPU3 1222 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 BTAF1O14981 1849 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 ARHGEF37A1IGU5 675 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 TK2O00142 265 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 TPST1O60507 370 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 CCND2P30279 289 aa13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 ZNF143P52747 638 aaPredicted RBP13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 MCCD1P59942 119 aaPredicted RBP13.8□□□□□ -0.2
EIF3CL-201ENST00000380876 XIAPP98170 497 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms