RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 PCDHA2Q9Y5H9 948 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SPDYE16A6NNV3 312 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 TOMM70O94826 608 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 RBP1P09455 135 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 ERVK-10P10266 1014 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 SHMT1P34896 483 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 PTPN11Q06124 597 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 FRG1Q14331 258 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 MXD4Q14582 209 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 MYBPC3Q14896 1274 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 POLD3Q15054 466 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 SPDYE2Q495Y8 402 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 SPANXN3Q5MJ09 141 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 KCNT2Q6UVM3 1135 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 C3orf67Q6ZVT6 689 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 NCCRP1Q6ZVX7 275 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 SMIM5Q71RC9 77 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 LRRC8DQ7L1W4 858 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 CCDC117Q8IWD4 279 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 C12orf56Q8IXR9 622 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 SCAIQ8N9R8 606 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 SHCBP1Q8NEM2 672 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 HTR3CQ8WXA8 447 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 GATA6Q92908 595 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 OMA1Q96E52 524 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 DEPDC7Q96QD5 511 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 MIPEPQ99797 713 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 APOL2Q9BQE5 337 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 WDR12Q9GZL7 423 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 C1orf21Q9H246 121 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 GPRC5DQ9NZD1 345 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 POLIQ9UNA4 740 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 PCDHA11Q9Y5I1 949 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 FAM208AQ9UK61 1670 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 MAGEB16A2A368 324 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 DFFAO00273 331 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 RAD17O75943 681 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 IL18RAPO95256 599 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 HMGCRP04035 888 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 SNRPB2P08579 225 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 PRDX6P30041 224 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 PTPN7P35236 360 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 IL5RAQ01344 420 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 MTX3Q5HYI7 312 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 RC3H1Q5TC82 1133 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 NIM1KQ8IY84 436 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 NLGN1Q8N2Q7 840 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 IPMKQ8NFU5 416 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 RBBP8Q99708 897 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 EBF4Q9BQW3 602 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 REXO4Q9GZR2 422 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 DNAJC28Q9NX36 388 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 LMCD1Q9NZU5 365 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 CPSF3Q9UKF6 684 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 ATF5Q9Y2D1 282 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 RAD51BO15315 384 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 FDX1P10109 184 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 NFIAQ12857 509 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 GOLGA7BQ2TAP0 167 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 FAM98BQ52LJ0 330 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 DCAF6Q58WW2 860 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 TTC23Q5W5X9 447 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 ZDHHC13Q8IUH4 622 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 HERC6Q8IVU3 1022 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 SP8Q8IXZ3 490 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 C8orf59Q8N0T1 100 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 PGAM4Q8N0Y7 254 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 HPDLQ96IR7 371 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 WDR55Q9H6Y2 383 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 PCDH18Q9HCL0 1135 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 KIAA1257Q9ULG3 409 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 CLEC11AQ9Y240 323 aa9.25□□□□□ -0.93
CRNKL1-201ENST00000377327 LINC00854A0A1B0GVQ3 168 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 TMEM150BA6NC51 233 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 CYP2C8P10632 490 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 NPR1P16066 1061 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 TAL1P17542 331 aaPredicted RBP9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 SOX6P35712 828 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 NR2C2P49116 596 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 SOX10P56693 466 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 GTF2H3Q13889 308 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 TAF12Q16514 161 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 VWA5B1Q5TIE3 1220 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 WDR49Q8IV35 697 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 SMYD1Q8NB12 490 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 HELQQ8TDG4 1101 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 RNF139Q8WU17 664 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 UTP4Q969X6 686 aaKnown RBP9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 IFT43Q96FT9 208 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 PLEKHA5Q9HAU0 1116 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 DMAC2Q9NW81 257 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 ANKRD6Q9Y2G4 727 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 FADS3Q9Y5Q0 445 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 ASTN2O75129 1339 aaPredicted RBP9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 PDZK1P1A8MUH7 402 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 TRIM24O15164 1050 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 TYROBPO43914 113 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 BAIAP3O94812 1187 aa9.24□□□□□ -0.93
CRNKL1-201ENST00000377327 SEC24AO95486 1093 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms