RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 RGS4P49798 205 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 C11orf63Q6NUN7 778 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ZCCHC9Q8N567 271 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 HTRA1Q92743 480 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 C9orf72Q96LT7 481 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 SCGB3A2Q96PL1 93 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 SSU72Q9NP77 194 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 REXO2Q9Y3B8 237 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 PCDHB6Q9Y5E3 794 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 FOXN3O00409 490 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 GLDCP23378 1020 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 EIF4BP23588 611 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 NFX1Q12986 1120 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 EIF2S3LQ2VIR3 472 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 SLITRK4Q8IW52 837 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 EAF2Q96CJ1 260 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 ZFP42Q96MM3 310 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ZSWIM1Q9BR11 485 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 PELOQ9BRX2 385 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 UBQLN2Q9UHD9 624 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 DMRT2Q9Y5R5 561 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 AP3D1O14617 1153 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 SRP54P61011 504 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 NFIAQ12857 509 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 POLA2Q14181 598 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CLNKQ7Z7G1 428 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 TRIM9Q9C026 710 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CUX1P39880 1505 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 MMAAQ8IVH4 418 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 PUS7LQ9H0K6 701 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 FABP12A6NFH5 140 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CST8O60676 142 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 SOX30O94993 753 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ALDH9A1P49189 494 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 RTP1P59025 263 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 NCALDP61601 193 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 OCLNQ16625 522 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 KHDC1Q4VXA5 237 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 CYB5R4Q7L1T6 521 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 GALNT7Q86SF2 657 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 BPIFB6Q8NFQ5 453 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 HGH1Q9BTY7 390 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CD97P48960 835 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 MEA1Q16626 185 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 THEMISQ8N1K5 641 aaPredicted RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 SRFBP1Q8NEF9 429 aaKnown RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 FRMD6Q96NE9 622 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 CPNE1Q99829 537 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 TRMOQ9BU70 441 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 GNEQ9Y223 722 aaKnown RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 DYRK3O43781 588 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 RARBP10826 455 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 TFDP3Q5H9I0 405 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ANKS3Q6ZW76 656 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ZNF410Q86VK4 478 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 EPS8L3Q8TE67 593 aaKnown RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 SPOCK3Q9BQ16 436 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 RARAP10276 462 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 FOSL2P15408 326 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 FGFR3P22607 806 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 MAGEA3P43357 314 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 NIPAL4Q0D2K0 466 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 AFTPHQ6ULP2 937 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 TOM1L2Q6ZVM7 507 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 MAGEE2Q8TD90 523 aaPredicted RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 AGAP3Q96P47 875 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 DBNDD2Q9BQY9 259 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 MAN2B2Q9Y2E5 1009 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 POFUT2Q9Y2G5 429 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 TBC1D30Q9Y2I9 924 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 A0A0D9SFI3 127 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 LOC100506127A0A0U1RQW1 187 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 CD72P21854 359 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 TCF7P36402 384 aaPredicted RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 DYNLL1P63167 89 aaKnown RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 AP3B2Q13367 1082 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 GNA13Q14344 377 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 HKDC1Q2TB90 917 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ATP6AP1LQ52LC2 224 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 BEND4Q6ZU67 534 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ANO3Q9BYT9 981 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ACOT9Q9Y305 439 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 PCDHA1Q9Y5I3 950 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 PNMA6FA0A0J9YX94 578 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 MYCLP1P12525 358 aaPredicted RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 TTLL12Q14166 644 aaPredicted RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 ANO7Q6IWH7 933 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 GRAMD1CQ8IYS0 662 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 OR14K1Q8NGZ2 314 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 HYLS1Q96M11 299 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 TDRD1Q9BXT4 1180 aaKnown RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 RPF1Q9H9Y2 349 aaKnown RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 FOLH1BQ9HBA9 442 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 WWP2O00308 870 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 PDHA2P29803 388 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 PRKCEQ02156 737 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 SLC22A15Q8IZD6 547 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 NODALQ96S42 347 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ANKRA2Q9H9E1 313 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ST3GAL5Q9UNP4 418 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms