RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 RPA3P35244 121 aaPredicted RBP9.28□□□□□ -0.92
CSMD2-205ENST00000373381 CCT3P49368 545 aaKnown RBP9.28□□□□□ -0.92
CSMD2-205ENST00000373381 SCRN3Q0VDG4 424 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 MYBPC2Q14324 1141 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 FAM46CQ5VWP2 391 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 SLC30A5Q8TAD4 765 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 OSBPL5Q9H0X9 879 aaPredicted RBP9.28□□□□□ -0.92
CSMD2-205ENST00000373381 NT5MQ9NPB1 228 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 SLC26A3P40879 764 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 SMIM11AP58511 58 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 RBM43Q6ZSC3 357 aaKnown RBP9.28□□□□□ -0.92
CSMD2-205ENST00000373381 DENND5BQ6ZUT9 1274 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 NAT9Q9BTE0 207 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 METTL5Q9NRN9 209 aaKnown RBP9.28□□□□□ -0.92
CSMD2-205ENST00000373381 AP3M1Q9Y2T2 418 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 IFT52Q9Y366 437 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 DCKP27707 260 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 OR1E1P30953 314 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 SAMD3Q8N6K7 520 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 FAM81AQ8TBF8 368 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 SPPL2AQ8TCT8 520 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 UBASH3BQ8TF42 649 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 ASAH2Q9NR71 780 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 ADGRG1Q9Y653 693 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 ACO1P21399 889 aaKnown RBP9.28□□□□□ -0.92
CSMD2-205ENST00000373381 FAUP35544 74 aaKnown RBP9.28□□□□□ -0.92
CSMD2-205ENST00000373381 ATXN1P54253 815 aaKnown RBP9.28□□□□□ -0.92
CSMD2-205ENST00000373381 TMEM117Q9H0C3 514 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 MCUBQ9NWR8 336 aa9.28□□□□□ -0.92
CSMD2-205ENST00000373381 A0A0J9YVX5 310 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 FAM196BA6NMK8 535 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 ZNF879B4DU55 563 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 MAGEA9P43362 315 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 ACLYP53396 1101 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 BAATQ14032 418 aaPredicted RBP9.27□□□□□ -0.92
CSMD2-205ENST00000373381 OAFQ86UD1 273 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 FIG4Q92562 907 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 LRRC40Q9H9A6 602 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 MRPL17Q9NRX2 175 aaKnown RBP9.27□□□□□ -0.92
CSMD2-205ENST00000373381 MRPS17Q9Y2R5 130 aaKnown RBP9.27□□□□□ -0.92
CSMD2-205ENST00000373381 PRAG1Q86YV5 1406 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 FAM92AA1XBS5 289 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 CCDC162PA2VCL2 907 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 CASP6P55212 293 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 MCRS1Q96EZ8 462 aa9.27□□□□□ -0.92
CSMD2-205ENST00000373381 KCNA5P22460 613 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ACSM2AQ08AH3 577 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 FNDC5Q8NAU1 212 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 TMEM8AQ9HCN3 771 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ABCB6Q9NP58 842 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 PCDHB5Q9Y5E4 795 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 HMGXB3Q12766 1538 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ITGA8P53708 1063 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 TXNRD1Q16881 649 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ZNF605Q86T29 641 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 TRIM39Q9HCM9 518 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 VANGL2Q9ULK5 521 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 NKRFO15226 690 aaKnown RBP eCLIP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ALPPL2P10696 532 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ME2P23368 584 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 PABPC1LQ4VXU2 614 aaKnown RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ZNF563Q8TA94 476 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 GSAPA4D1B5 854 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 IGF2BP3O00425 579 aaKnown RBP eCLIP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 SCN2BO60939 215 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 BPNT1O95861 308 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 IFNA6P05013 189 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 THRAP10827 490 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 TFE3P19532 575 aaPredicted RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 NFRKBQ6P4R8 1299 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 RAB11FIP2Q7L804 512 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 NRSN1Q8IZ57 195 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 NKX2-3Q8TAU0 364 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 GBA2Q9HCG7 927 aaPredicted RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 MRPS23Q9Y3D9 190 aaKnown RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 USP15Q9Y4E8 981 aaPredicted RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 PLGP00747 810 aaPredicted RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 PSEN2P49810 448 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 MZT2BQ6NZ67 158 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 VPS45Q9NRW7 570 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 TMCO1Q9UM00 188 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 GIT1Q9Y2X7 761 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 CSH1P0DML2 217 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 CSH2P0DML3 217 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 EN1Q05925 392 aaPredicted RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 LONRF1Q17RB8 773 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ADSSL1Q8N142 457 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 OR10H5Q8NGA6 315 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ZNF483Q8TF39 744 aaPredicted RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 COL15A1P39059 1388 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 SRP54P61011 504 aaKnown RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 TMEM164Q5U3C3 297 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 DDX47Q9H0S4 455 aaKnown RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 PABPC3Q9H361 631 aaKnown RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 PLEKHA1Q9HB21 404 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 GPRC5DQ9NZD1 345 aa9.27□□□□□ -0.93
CSMD2-205ENST00000373381 RSL24D1Q9UHA3 163 aaKnown RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 ERI2A8K979 691 aaKnown RBP9.27□□□□□ -0.93
CSMD2-205ENST00000373381 RAMP2O60895 175 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms