RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SEMA3BQ13214 749 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 PON2Q15165 354 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 IFI16Q16666 785 aaKnown RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 MPP7Q5T2T1 576 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 ACBD5Q5T8D3 534 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 MANEALQ5VSG8 457 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 ASTLQ6HA08 431 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 ZNF662Q6ZS27 426 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 RNF10Q8N5U6 811 aaKnown RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 TEKT4Q8WW24 435 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 CALR3Q96L12 384 aaKnown RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 NEU3Q9UQ49 428 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 DRGXA6NNA5 263 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 GLULP15104 373 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 AMPD2Q01433 879 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 NRG1Q02297 640 aaPredicted RBP16.83■□□□□ 0.28
TMEM53-203ENST00000372242 SIGLEC14Q08ET2 396 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 C5orf22Q49AR2 442 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 FSCBQ5H9T9 825 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 ZFYVE27Q5T4F4 411 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 TFAP2DQ7Z6R9 452 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 PSTKQ8IV42 348 aaKnown RBP16.83■□□□□ 0.28
TMEM53-203ENST00000372242 SFTPA1Q8IWL2 248 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 REXO1L1PQ8IX06 675 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 CCAR2Q8N163 923 aaKnown RBP16.83■□□□□ 0.28
TMEM53-203ENST00000372242 FAM3CQ92520 227 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 EPAS1Q99814 870 aa16.83■□□□□ 0.28
TMEM53-203ENST00000372242 IRX2Q9BZI1 471 aaPredicted RBP16.83■□□□□ 0.28
TMEM53-203ENST00000372242 USP27XA6NNY8 438 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 H0Y626 953 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 FTCDO95954 541 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 KRT7P08729 469 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 CD48P09326 243 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 ALADP13716 330 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 GOT1P17174 413 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 NUMBP49757 651 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 PRKCQQ04759 706 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 DPYSL2Q16555 572 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 MFN1Q8IWA4 741 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 CD101Q93033 1021 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 TBC1D31Q96DN5 1066 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 P2RY13Q9BPV8 354 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 ZYG11BQ9C0D3 744 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 DEC1Q9P2X7 70 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 NDRG2Q9UN36 371 aaKnown RBP16.82■□□□□ 0.28
TMEM53-203ENST00000372242 F5P12259 2224 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 A0A1B0GVM2 712 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 TCAF2A6NFQ2 919 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 ZSCAN12O43309 604 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 LUC7L3O95232 432 aaKnown RBP16.82■□□□□ 0.28
TMEM53-203ENST00000372242 EPHB2P29323 1055 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 MARCKSL1P49006 195 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 DGKGP49619 791 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 CDH6P55285 790 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 TPI1P60174 286 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 CDH18Q13634 790 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 TTC39BQ5VTQ0 682 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-203ENST00000372242 RNF43Q68DV7 783 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 ZNF852Q6ZMS4 543 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 TRIM67Q6ZTA4 783 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 POLNQ7Z5Q5 900 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 RHOT1Q8IXI2 618 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 KCTD6Q8NC69 237 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 PNKPQ96T60 521 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 PCDH18Q9HCL0 1135 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 ABCB8Q9NUT2 735 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 CWC15Q9P013 229 aaKnown RBP16.82■□□□□ 0.28
TMEM53-203ENST00000372242 PPARGC1AQ9UBK2 798 aaKnown RBP16.82■□□□□ 0.28
TMEM53-203ENST00000372242 FBXO10Q9UK96 956 aa16.82■□□□□ 0.28
TMEM53-203ENST00000372242 MTF2Q9Y483 593 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-203ENST00000372242 KIAA1549LQ6ZVL6 1849 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 DOCK4Q8N1I0 1966 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 PI4K2BG5E9Z4 385 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 TNFRSF10AO00220 468 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 EEF2KO00418 725 aaKnown RBP16.81■□□□□ 0.28
TMEM53-203ENST00000372242 STK25O00506 426 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 PDGFBP01127 241 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-203ENST00000372242 CISD3P0C7P0 127 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 HLA-FP30511 346 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 CDH4P55283 916 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 STARD6P59095 220 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 MMRN1Q13201 1228 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 KRT81Q14533 505 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 NT5DC3Q86UY8 548 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 PHTF2Q8N3S3 785 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 OR52K2Q8NGK3 314 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 RAPGEF5Q92565 580 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 KRT35Q92764 455 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 SHDQ96IW2 340 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 FOXQ1Q9C009 403 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 ARHGEF4Q9NR80 690 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 NDFIP2Q9NV92 336 aa16.81■□□□□ 0.28
TMEM53-203ENST00000372242 PACSIN2Q9UNF0 486 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-203ENST00000372242 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.8■□□□□ 0.28
TMEM53-203ENST00000372242 ANTXRLA6NF34 631 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 CLDN11O75508 207 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 KAT7O95251 611 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 CD70P32970 193 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 EIF2DP41214 584 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms