RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PIK3C2AO00443 1686 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 AHCYL1O43865 530 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 TSPAN3O60637 253 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 LAYNQ6UX15 382 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 BNC2Q6ZN30 1099 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 PALB2Q86YC2 1186 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 TMEM120AQ9BXJ8 343 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 ADGRE3Q9BY15 652 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 EFCAB1Q9HAE3 211 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 IL1RL2Q9HB29 575 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 SMPD4Q9NXE4 827 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 SMIM22K7EJ46 135 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 TM9SF1O15321 606 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 PYGMP11217 842 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 RENBPP51606 427 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 ERMARDQ5T6L9 678 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 MTDHQ86UE4 582 aaKnown RBP13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 EMC1Q8N766 993 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 TRMT6Q9UJA5 497 aaKnown RBP13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 IZUMO2Q6UXV1 221 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 C1orf186Q6ZWK4 172 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 MTMR14Q8NCE2 650 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 SLC24A2Q9UI40 661 aa13.61□□□□□ -0.23
RAPGEF1-201ENST00000372189 SYNDIG1LA6NDD5 238 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 ZNF839A8K0R7 811 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 CSE1LP55060 971 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 LRRC6Q86X45 466 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 FBXO36Q8NEA4 188 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 HELQQ8TDG4 1101 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 SLC39A10Q9ULF5 831 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 SF3B1O75533 1304 aaKnown RBP eCLIP13.6□□□□□ -0.235e-9■■■■■ 178.1
RAPGEF1-201ENST00000372189 CLPTM1O96005 669 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 CCDC130P13994 396 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 EIF2S3LQ2VIR3 472 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 CCSAPQ6IQ19 270 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 NEK10Q6ZWH5 1172 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 CCNJLQ8IV13 435 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 ARHGEF19Q8IW93 802 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 SLAIN1Q8ND83 568 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 C8orf4Q9NR00 106 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 DMGDHQ9UI17 866 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 FAM95CA0A1B0GW59 222 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 BDNFP23560 247 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 NUMBP49757 651 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 GCNT1Q02742 428 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 RASA2Q15283 850 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 HIST2H2ACQ16777 129 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 TRMT5Q32P41 509 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 HIST2H2AA3Q6FI13 130 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 KIAA0319LQ8IZA0 1049 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 CCDC33Q8N5R6 958 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 BLOC1S4Q9NUP1 217 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 PROSCO94903 275 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 GLI1P08151 1106 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 TGM2P21980 687 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 ZNF268Q14587 947 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 PABPC1LQ4VXU2 614 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 ATXN2LQ8WWM7 1075 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 ZNF606Q8WXB4 792 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 TP53INP1Q96A56 240 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 NT5MQ9NPB1 228 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 EXOSC4Q9NPD3 245 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 MON2Q7Z3U7 1717 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 ANKRD26Q9UPS8 1709 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 FAM25AB3EWG3 89 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 FAM25CB3EWG5 89 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 FAM25GB3EWG6 89 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 CRTAMO95727 393 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 CD52P31358 61 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 CACNA2D1P54289 1103 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 YWHAZP63104 245 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 FAXCQ5TGI0 409 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 RETSATQ6NUM9 610 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 IL31RAQ8NI17 732 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 OTULINQ96BN8 352 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 PACSIN1Q9BY11 444 aa13.6□□□□□ -0.23
RAPGEF1-201ENST00000372189 ALDH1A2O94788 518 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 PCDH8O95206 1070 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 SPOCD1Q6ZMY3 1216 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 DCLK3Q9C098 648 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 LACRTQ9GZZ8 138 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 NMRK2Q9NPI5 230 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 ST3GAL5Q9UNP4 418 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 ATRNO75882 1429 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 CES2O00748 559 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 MAP3K6O95382 1288 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 MZF1P28698 734 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 CDH8P55286 799 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 RALGDSQ12967 914 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 C12orf4Q9NQ89 552 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 A0A0G2JPF8 293 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 SMCO3A2RU48 225 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 HNRNPCL3B7ZW38 293 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 NCAM2O15394 837 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 HNRNPCL4P0DMR1 293 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 CNTFP26441 200 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 SERPINB5P36952 375 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 OCLNQ16625 522 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms