RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 VANGL1Q8TAA9 524 aaPredicted RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ARMC5Q96C12 935 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 TUBB6Q9BUF5 446 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 A1CFQ9NQ94 594 aaKnown RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 COG5Q9UP83 839 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 OVOS2A0A0G2JMS6 1433 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 OVOS2A0A0J9YW53 1432 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 OVOS2Q6IE36 1432 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 SAMD9Q5K651 1589 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 GNB5O14775 395 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 CFIP05156 583 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 RARGP13631 454 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ITGA3P26006 1051 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 GFOD2Q3B7J2 385 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 AGAP9Q5VTM2 703 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 CXorf40BQ96DE9 158 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 U3KQV3 271 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 PPP1R3GB7ZBB8 358 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 AKAP3O75969 853 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ZNF24P17028 368 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ITGAXP20702 1163 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 LRP8Q14114 963 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ZNF606Q8WXB4 792 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 C7orf25Q9BPX7 421 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 PAPOLBQ9NRJ5 636 aaKnown RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ABHD14A-ACY1A0A1B0GW23 586 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 C9JVG2 144 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 OR10H2O60403 315 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 CST3P01034 146 aaPredicted RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ENDOUP21128 410 aaKnown RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 GABPB1Q06547 395 aaPredicted RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 MRPL28Q13084 256 aaKnown RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 TRMT2AQ8IZ69 625 aaKnown RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 SEC16BQ96JE7 1060 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ZNF558Q96NG5 402 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ADI1Q9BV57 179 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 NXF3Q9H4D5 531 aaKnown RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 AK5Q9Y6K8 562 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 ZFYVE16Q7Z3T8 1539 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 RNASEH2AO75792 299 aaKnown RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 CTSOP43234 321 aaPredicted RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 SF1Q15637 639 aaKnown RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 MINDY4Q4G0A6 757 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 SBK1Q52WX2 424 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 PRSS55Q6UWB4 352 aaPredicted RBP7.51□□□□□ -1.21
VPS13A-202ENST00000357409 METTL6Q8TCB7 284 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 SLC4A9Q96Q91 983 aa7.51□□□□□ -1.21
VPS13A-202ENST00000357409 TCEA3O75764 348 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 ASGR1P07306 291 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 TOB1P50616 345 aaPredicted RBP7.5□□□□□ -1.21
VPS13A-202ENST00000357409 CCT8P50990 548 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 TAP1Q03518 808 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 HSDL1Q3SXM5 330 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 PDPK2PQ6A1A2 396 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 UGT3A1Q6NUS8 523 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 DSELQ8IZU8 1212 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 NLGN4XQ8N0W4 816 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 OR52K1Q8NGK4 314 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 DPY30Q9C005 99 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 BRINP2Q9C0B6 783 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 HIPK3Q9H422 1215 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 MID1IP1Q9NPA3 183 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 ATP7AQ04656 1500 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 PIPSLA2A3N6 862 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 SAP18O00422 153 aaKnown RBP7.5□□□□□ -1.21
VPS13A-202ENST00000357409 CCDC22O60826 627 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 USP1O94782 785 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 IL18RAPO95256 599 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 VCLP18206 1134 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 ATP5C1P36542 298 aaKnown RBP7.5□□□□□ -1.21
VPS13A-202ENST00000357409 CTBP1Q13363 440 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 PSMD5Q16401 504 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 ICE2Q659A1 982 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 TMEM237Q96Q45 408 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 RABGEF1Q9UJ41 708 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 TRPV2Q9Y5S1 764 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 ZMYM4Q5VZL5 1548 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 RBAK-RBAKDNI3L0D1 243 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 KIAA0391O15091 583 aaKnown RBP7.5□□□□□ -1.21
VPS13A-202ENST00000357409 KPNA5O15131 536 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 MSI1O43347 362 aaKnown RBP7.5□□□□□ -1.21
VPS13A-202ENST00000357409 RHOBTB3O94955 611 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 RARRES1P49788 294 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 BIKQ13323 160 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 OTOP1Q7RTM1 612 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 ELOVL6Q9H5J4 265 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 SPATA2Q9UM82 520 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 SOX13Q9UN79 622 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 NAALADL1Q9UQQ1 740 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 HMGCRP04035 888 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 ZNF37AP17032 561 aaPredicted RBP7.5□□□□□ -1.21
VPS13A-202ENST00000357409 GMFBP60983 142 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 PDIA5Q14554 519 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 CBWD6Q4V339 395 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 BBS7Q8IWZ6 715 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 ZNF579Q8NAF0 562 aaKnown RBP7.5□□□□□ -1.21
VPS13A-202ENST00000357409 CASKIN2Q8WXE0 1202 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 MRPL39Q9NYK5 338 aaKnown RBP7.5□□□□□ -1.21
VPS13A-202ENST00000357409 LIMD1Q9UGP4 676 aa7.5□□□□□ -1.21
VPS13A-202ENST00000357409 ASF1AQ9Y294 204 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms