RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 GTF3C2Q8WUA4 911 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 LRRC19Q9H756 370 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ETNK2Q9NVF9 386 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 THAP1Q9NVV9 213 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 UMODL1Q5DID0 1318 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 C16orf96A6NNT2 1141 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 HNRNPCL2B2RXH8 293 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 TPP1O14773 563 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PHGDHO43175 533 aaKnown RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 H2AFYO75367 372 aaKnown RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PTPRAP18433 802 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PGAM1P18669 254 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 MAPRE1Q15691 268 aaKnown RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 C15orf52Q6ZUT6 534 aaKnown RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ALLCQ8N6M5 410 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 KREMEN1Q96MU8 473 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 DYRK4Q9NR20 520 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 TMEM161AQ9NX61 479 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 TRIM43BA6NCK2 446 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 C2orf81A6NN90 581 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 F5H5T6 163 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 B4GALT5O43286 388 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ARHGEF9O43307 516 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ZMPSTE24O75844 475 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 TRIM16O95361 564 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 USP17L7P0C7H9 530 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 SERPINB10P48595 397 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 UBE3AQ05086 875 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 CDH18Q13634 790 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 CAPSQ13938 189 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 AASDHQ4L235 1098 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ZC3H12AQ5D1E8 599 aaKnown RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 TMC5Q6UXY8 1006 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 RRM2BQ7LG56 351 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 OTOAQ7RTW8 1153 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PLD3Q8IV08 490 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 RBM12BQ8IXT5 1001 aaKnown RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 SIX5Q8N196 739 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 DNAJC1Q96KC8 554 aaKnown RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 MARK4Q96L34 752 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PGLYRP2Q96PD5 576 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 NCKIPSDQ9NZQ3 722 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 SELENONQ9NZV5 590 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 COG5Q9UP83 839 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PCDHB7Q9Y5E2 793 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 SIGLEC1Q9BZZ2 1709 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 A0A1W2PPM1 405 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 HEATR9A2RTY3 570 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 UBDO15205 165 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 CBFA2T3O75081 653 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 FBXO21O94952 628 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 PROCP04070 461 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 GTF2A2P52657 109 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 C11orf91Q3C1V1 193 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ZC3H12BQ5HYM0 836 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF470Q6ECI4 717 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SLC27A1Q6PCB7 646 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 DHDDSQ86SQ9 333 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 HORMAD1Q86X24 394 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 EFCAB3Q8N7B9 438 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 KYQ8NBH2 561 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 OR9Q1Q8NGQ5 310 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 TBCBQ99426 244 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 MRPS26Q9BYN8 205 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 GPBP1L1Q9HC44 474 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ADARB2Q9NS39 739 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ATAD3AQ9NVI7 634 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 TUBA8Q9NY65 449 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 C1orf232A0A0U1RR37 186 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SIGLEC16A6NMB1 481 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 C5orf58C9J3I9 102 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 GPR182O15218 404 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 DDX3YO15523 660 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 PEX11AO75192 247 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ITGB6P18564 788 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 PSMB4P28070 264 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ADORA2AP29274 412 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SOAT1P35610 550 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 CCR3P51677 355 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 HIRAP54198 1017 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 NOMO3P69849 1222 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 BMT2Q1RMZ1 405 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 CTXN3Q4LDR2 81 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 CYP2R1Q6VVX0 501 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ILDR2Q71H61 639 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 APTXQ7Z2E3 356 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF572Q7Z3I7 529 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 HEATR4Q86WZ0 1026 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SNX32Q86XE0 403 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 KIAA0319LQ8IZA0 1049 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 CARNMT1Q8N4J0 409 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 CCDC28BQ9BUN5 200 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ASB7Q9H672 318 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 NMRK2Q9NPI5 230 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 XPNPEP3Q9NQH7 507 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SOX13Q9UN79 622 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 TDRKHQ9Y2W6 561 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 HBS1LQ9Y450 684 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 RBAK-RBAKDNI3L0D1 243 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms