RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
ATXN3-201ENST00000340660 TREML1Q86YW5 311 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 DMRTC2Q8IXT2 367 aaPredicted RBP11.79□□□□□ -0.52
ATXN3-201ENST00000340660 DCP1BQ8IZD4 617 aaKnown RBP11.79□□□□□ -0.52
ATXN3-201ENST00000340660 FMR1NBQ8N0W7 255 aaPredicted RBP11.79□□□□□ -0.52
ATXN3-201ENST00000340660 DEPTORQ8TB45 409 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 TBCKQ8TEA7 893 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 STK32AQ8WU08 396 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 JPH3Q8WXH2 748 aaPredicted RBP11.79□□□□□ -0.52
ATXN3-201ENST00000340660 CATSPER2Q96P56 530 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 XPO6Q96QU8 1125 aaKnown RBP11.79□□□□□ -0.52
ATXN3-201ENST00000340660 PREBQ9HCU5 417 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 GJB4Q9NTQ9 266 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 ANKEF1Q9NU02 776 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 PTPRJQ12913 1337 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 HEATR9A2RTY3 570 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 NPC1O15118 1278 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 PRC1O43663 620 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 SLITRK3O94933 977 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 MBL2P11226 248 aaPredicted RBP11.78□□□□□ -0.52
ATXN3-201ENST00000340660 CD99P14209 185 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 PFKFB3Q16875 520 aaPredicted RBP11.78□□□□□ -0.52
ATXN3-201ENST00000340660 CCDC142Q17RM4 750 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 NCEH1Q6PIU2 408 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 TAOK1Q7L7X3 1001 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 RAB11FIP2Q7L804 512 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 B3GNT8Q7Z7M8 397 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 PRIMA1Q86XR5 153 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 SERAC1Q96JX3 654 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 ACO2Q99798 780 aaKnown RBP11.78□□□□□ -0.52
ATXN3-201ENST00000340660 BBS2Q9BXC9 721 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 GSX1Q9H4S2 264 aaPredicted RBP11.78□□□□□ -0.52
ATXN3-201ENST00000340660 USP29Q9HBJ7 922 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 LATS2Q9NRM7 1088 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 TRPM5Q9NZQ8 1165 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 PISDQ9UG56 409 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 SNX14Q9Y5W7 946 aa11.78□□□□□ -0.52
ATXN3-201ENST00000340660 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.53
ATXN3-201ENST00000340660 GALCP54803 685 aa11.77□□□□□ -0.53
ATXN3-201ENST00000340660 RPS14P62263 151 aaKnown RBP11.77□□□□□ -0.53
ATXN3-201ENST00000340660 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.53
ATXN3-201ENST00000340660 CAMK2GQ13555 558 aaPredicted RBP11.77□□□□□ -0.53
ATXN3-201ENST00000340660 CDKN3Q16667 212 aa11.77□□□□□ -0.53
ATXN3-201ENST00000340660 WSCD1Q658N2 575 aa11.77□□□□□ -0.53
ATXN3-201ENST00000340660 CASC1Q6TDU7 716 aa11.77□□□□□ -0.53
ATXN3-201ENST00000340660 EFL1Q7Z2Z2 1120 aaKnown RBP11.77□□□□□ -0.53
ATXN3-201ENST00000340660 THEM5Q8N1Q8 247 aa11.77□□□□□ -0.53
ATXN3-201ENST00000340660 TMTC2Q8N394 836 aa11.77□□□□□ -0.53
ATXN3-201ENST00000340660 LEO1Q8WVC0 666 aaPredicted RBP11.77□□□□□ -0.53
ATXN3-201ENST00000340660 DUSP9Q99956 384 aaKnown RBP11.77□□□□□ -0.53
ATXN3-201ENST00000340660 KCND3Q9UK17 655 aa11.77□□□□□ -0.53
ATXN3-201ENST00000340660 DAAM1Q9Y4D1 1078 aa11.77□□□□□ -0.53
ATXN3-201ENST00000340660 SCN8AQ9UQD0 1980 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 CPED1A4D0V7 1026 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 LYPLA2O95372 231 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 MCF2P10911 925 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 HARSP12081 509 aaKnown RBP11.76□□□□□ -0.53
ATXN3-201ENST00000340660 CYP3A5P20815 502 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 PROZP22891 400 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 GNA11P29992 359 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 LIFRP42702 1097 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 NAMPTP43490 491 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 HARS2P49590 506 aaKnown RBP11.76□□□□□ -0.53
ATXN3-201ENST00000340660 EIF3IQ13347 325 aaKnown RBP11.76□□□□□ -0.53
ATXN3-201ENST00000340660 DHX8Q14562 1220 aaKnown RBP11.76□□□□□ -0.53
ATXN3-201ENST00000340660 DRAP1Q14919 205 aaPredicted RBP11.76□□□□□ -0.53
ATXN3-201ENST00000340660 GEN1Q17RS7 908 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 PRR30Q53SZ7 412 aaPredicted RBP11.76□□□□□ -0.53
ATXN3-201ENST00000340660 NCAPH2Q6IBW4 605 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 TPGS1Q6ZTW0 290 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 SCN4BQ8IWT1 228 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 RBBP8NLQ8NC74 664 aaPredicted RBP11.76□□□□□ -0.53
ATXN3-201ENST00000340660 SAP130Q9H0E3 1048 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 EPB41L5Q9HCM4 733 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 ABCB6Q9NP58 842 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 KCNMB3Q9NPA1 279 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 DIAPH3Q9NSV4 1193 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 NLGN3Q9NZ94 848 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 DSEQ9UL01 958 aa11.76□□□□□ -0.53
ATXN3-201ENST00000340660 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.75□□□□□ -0.53
ATXN3-201ENST00000340660 A0A1W2PQ27 194 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 A0A1W2PQ64 194 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 A0A1W2PQC6 194 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 DYRK3O43781 588 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 CNTN5O94779 1100 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 CXCL8P10145 99 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 LIFP15018 202 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 ITIH1P19827 911 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 NFE2Q16621 373 aaPredicted RBP11.75□□□□□ -0.53
ATXN3-201ENST00000340660 SLC45A4Q5BKX6 768 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 TCTN3Q6NUS6 607 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 ASB18Q6ZVZ8 466 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 METTL23Q86XA0 190 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 MFSD2AQ8NA29 543 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 APOBEC4Q8WW27 367 aaKnown RBP11.75□□□□□ -0.53
ATXN3-201ENST00000340660 SORCS1Q8WY21 1168 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 CCDC43Q96MW1 224 aaKnown RBP11.75□□□□□ -0.53
ATXN3-201ENST00000340660 MTA3Q9BTC8 594 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 CBX8Q9HC52 389 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms