RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 YWHAHQ04917 246 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 TCEAL1Q15170 157 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 NRF1Q16656 503 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 ZNF484Q5JVG2 852 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 BTBD8Q5XKL5 378 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 TREML1Q86YW5 311 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 RIOX2Q8IUF8 465 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 FBXO27Q8NI29 283 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 DENND1AQ8TEH3 1009 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 MFSD3Q96ES6 412 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 KLHL4Q9C0H6 718 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 PIF1Q9H611 641 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 ARHGEF38Q9NXL2 777 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 TMEM216Q9P0N5 145 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 SNX13Q9Y5W8 968 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 LAMB1P07942 1786 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 B3GAT3O94766 335 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 SUPT7LO94864 414 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 FGFR1P11362 822 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 GM2AP17900 193 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 GCAP28676 217 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 NDUFV1P49821 464 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 SERPINB8P50452 374 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 CTBP1Q13363 440 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 WSCD1Q658N2 575 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 LBX2Q6XYB7 198 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 ZNF398Q8TD17 642 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 CERS2Q96G23 380 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 TEPSINQ96N21 525 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 UPF3AQ9H1J1 476 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 ZNF212Q9UDV6 495 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 PCDHA11Q9Y5I1 949 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 BNIP3LO60238 219 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 TRIM13O60858 407 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 T-ENOLP0DO92 83 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 SP100P23497 879 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 ADORA2AP29274 412 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 GRIK1P39086 918 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 ACADSBP45954 432 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 ANKRD13AQ8IZ07 590 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 GPRC5AQ8NFJ5 357 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 CMASQ8NFW8 434 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 SYT15Q9BQS2 421 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 MRPL1Q9BYD6 325 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 NMRAL1Q9HBL8 299 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 SNX15Q9NRS6 342 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 CITO14578 2027 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 SHANK3Q9BYB0 1731 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 ATP6AP2A0A1C7CYW4 349 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 ATP6AP2O75787 350 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 OAS1P00973 400 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 PGAM1P18669 254 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 ABCE1P61221 599 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 CYLC2Q14093 348 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 ACAP1Q15027 740 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 CCDC142Q17RM4 750 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 KCTD15Q96SI1 283 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 AGAP2Q99490 1192 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 EFHD1Q9BUP0 239 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 FICDQ9BVA6 458 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 EIF2AQ9BY44 585 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 DDX43Q9NXZ2 648 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 CCDC167Q9P0B6 97 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 PDP2Q9P2J9 529 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 SLC7A8Q9UHI5 535 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 SPTLC1O15269 473 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 ERCC2P18074 760 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 GRK2P25098 689 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 MBTD1Q05BQ5 628 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 PRKD1Q15139 912 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 BNC2Q6ZN30 1099 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 FASTKD5Q7L8L6 764 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 TFAP2DQ7Z6R9 452 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 FAM156AQ8NDB6 213 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 PDZD7Q9H5P4 517 aa11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-201ENST00000339861 E7ENQ6 273 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 SUPT3HO75486 399 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 CD4P01730 458 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 GFAPP14136 432 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 PAMP19021 973 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 ILDR2Q71H61 639 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 TTC30AQ86WT1 665 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 KCTD4Q8WVF5 259 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 SKA2Q8WVK7 121 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 CDCA5Q96FF9 252 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 OLFM3Q96PB7 478 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 XYLT2Q9H1B5 865 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 PPM1HQ9ULR3 514 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 COL22A1Q8NFW1 1626 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 CAPN8A6NHC0 703 aa11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 SMNDC1O75940 238 aaKnown RBP eCLIP11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 HNRNPLP14866 589 aaKnown RBP eCLIP11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 YBX3P16989 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
SEMA4D-201ENST00000339861 NFKB1P19838 968 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms