RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
LIMK1-201ENST00000336180 KCTD13Q8WZ19 329 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 MOCOSQ96EN8 888 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 SIGLEC10Q96LC7 697 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 NPHS2Q9NP85 383 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 CNGB3Q9NQW8 809 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 MARCOQ9UEW3 520 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-201ENST00000336180 A0A0A0MRY4 1105 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 SNX3O60493 162 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 LPXNO60711 386 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 UBOX5O94941 541 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 KITP10721 976 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 NFKB1P19838 968 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 RPL9P32969 192 aaKnown RBP12.93□□□□□ -0.34
LIMK1-201ENST00000336180 DPYSQ14117 519 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 MGAT5BQ3V5L5 792 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 SCD5Q86SK9 330 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 CROCCP2Q86T23 111 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 THEM5Q8N1Q8 247 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF778Q96MU6 729 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 SPATA13Q96N96 652 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 OLFM3Q96PB7 478 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 HMX1Q9NP08 348 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-201ENST00000336180 VANGL2Q9ULK5 521 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 A6NNZ2 444 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 TRDMT1O14717 391 aaKnown RBP12.92□□□□□ -0.34
LIMK1-201ENST00000336180 DCLK1O15075 740 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF623O75123 536 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 TCEA3O75764 348 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 ASMTLO95671 621 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 CPB1P15086 417 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 ATP2A2P16615 1042 aaKnown RBP12.92□□□□□ -0.34
LIMK1-201ENST00000336180 BGNP21810 368 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 VEGFBP49765 207 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 IL9RQ01113 521 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 EML3Q32P44 896 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 TUBB8Q3ZCM7 444 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 NT5C3BQ969T7 300 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 CENPTQ96BT3 561 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF419Q96HQ0 510 aaPredicted RBP12.92□□□□□ -0.34
LIMK1-201ENST00000336180 LBHD1Q9BQE6 289 aaPredicted RBP12.92□□□□□ -0.34
LIMK1-201ENST00000336180 ACBD6Q9BR61 282 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 GMIPQ9P107 970 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 PDCD11Q14690 1871 aaKnown RBP12.92□□□□□ -0.34
LIMK1-201ENST00000336180 COQ9O75208 318 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 PAGE1O75459 146 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 PTPN3P26045 913 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 CTXN3Q4LDR2 81 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 PPM1JQ5JR12 505 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 ADGRD1Q6QNK2 874 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 SLC24A5Q71RS6 500 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 SPATA21Q7Z572 469 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 ARMC2Q8NEN0 867 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 FRMD8P1Q9BZ68 369 aaPredicted RBP12.92□□□□□ -0.34
LIMK1-201ENST00000336180 FOXP3Q9BZS1 431 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 PHTF1Q9UMS5 762 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 TYROBPO43914 113 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 GJB3O75712 270 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 MAXP61244 160 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 GPNMBQ14956 572 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 PCSK7Q16549 785 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 KLHL38Q2WGJ6 581 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
LIMK1-201ENST00000336180 FAM171BQ6P995 826 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 LRRC8CQ8TDW0 803 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 DNAI2Q9GZS0 605 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF358Q9NW07 568 aa12.92□□□□□ -0.34
LIMK1-201ENST00000336180 KIAA0100Q14667 2235 aaKnown RBP12.92□□□□□ -0.34
LIMK1-201ENST00000336180 C5orf60A6NFR6 353 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 ADAM12O43184 909 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 GCATO75600 419 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 ALDH1A1P00352 501 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 RAB41Q5JT25 222 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 LRRC8DQ7L1W4 858 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 PIGWQ7Z7B1 504 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 MZB1Q8WU39 189 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 MFSD3Q96ES6 412 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 STAMBPL1Q96FJ0 436 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 FCRL2Q96LA5 508 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-201ENST00000336180 AGAP2Q99490 1192 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 MYO7AQ13402 2215 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 CCT8L1PA6NM43 557 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 APOEP02649 317 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 ZFXP17010 805 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-201ENST00000336180 CYP2C18P33260 490 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 CD68P34810 354 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-201ENST00000336180 PDK1Q15118 436 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 PSMD5Q16401 504 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 TBC1D1Q86TI0 1168 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-201ENST00000336180 DENND1AQ8TEH3 1009 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 SLC44A1Q8WWI5 657 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 SUSD3Q96L08 255 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 FAM210AQ96ND0 272 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 FCRL3Q96P31 734 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-201ENST00000336180 KLHL5Q96PQ7 755 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 EBNA1BP2Q99848 306 aaKnown RBP12.91□□□□□ -0.34
LIMK1-201ENST00000336180 GORASP1Q9BQQ3 440 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 USP15Q9Y4E8 981 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms