RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 MLF2Q15773 248 aaPredicted RBP20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 C1orf228Q6PIY5 440 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 C12orf40Q86WS4 652 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 CCAR2Q8N163 923 aaKnown RBP20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 CFAP52Q8N1V2 620 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 PHTF2Q8N3S3 785 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 TTC8Q8TAM2 541 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 EDAQ92838 391 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 LMLNQ96KR4 655 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 RPRD1AQ96P16 312 aaPredicted RBP20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 XPO6Q96QU8 1125 aaKnown RBP20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 PLK2Q9NYY3 685 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 CLEC4EQ9ULY5 219 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 PIAS3Q9Y6X2 628 aa20.66■□□□□ 0.9
SCAMP3-201ENST00000302631 A0A0A0MRY4 1105 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 A0A1B0GVM2 712 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 KRBA1A5PL33 1030 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 TCAF2A6NFQ2 919 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 WASH4PA8MWX3 477 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 DCXO43602 365 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 CTNNA2P26232 953 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 STARD6P59095 220 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 ALFQ53S48 1182 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 NLRP14Q86W24 1093 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 VSIG1Q86XK7 387 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 FIBINQ8TAL6 211 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 TBC1D31Q96DN5 1066 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 EPAS1Q99814 870 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 ZYG11BQ9C0D3 744 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 PCDH18Q9HCL0 1135 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 RCOR3Q9P2K3 495 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 SLC27A6Q9Y2P4 619 aa20.65■□□□□ 0.9
SCAMP3-201ENST00000302631 TYW5A2RUC4 315 aaKnown RBP20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 ZNF487B1APH4 448 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 SRGAP2O75044 1071 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 TULP3O75386 442 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 CLDN11O75508 207 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 CNTN5O94779 1100 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 LUC7L3O95232 432 aaKnown RBP20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 IL4RP24394 825 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 CTNNA1P35221 906 aaKnown RBP20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 SSR1P43307 286 aaKnown RBP20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 PDK2Q15119 407 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 TXNDC11Q6PKC3 985 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 KIAA0907Q7Z7F0 614 aaPredicted RBP20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 ZNF557Q8N988 423 aaPredicted RBP20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 HSPH1Q92598 858 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 ARHGEF3Q9NR81 526 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 DDX56Q9NY93 547 aaKnown RBP20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 CWC15Q9P013 229 aaKnown RBP20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 AMFRQ9UKV5 643 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 TBC1D30Q9Y2I9 924 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 PCDHA3Q9Y5H8 950 aa20.64■□□□□ 0.89
SCAMP3-201ENST00000302631 GOLGA6L9A6NEM1 432 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 USP27XA6NNY8 438 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 MAN2B1O00754 1011 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 RHOQP17081 205 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 KDELR1P24390 212 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 SLC6A11P48066 632 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 PEX5P50542 639 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 SIGLEC14Q08ET2 396 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 ASTLQ6HA08 431 aaPredicted RBP20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 SUGP1Q8IWZ8 645 aaKnown RBP20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 TRIM58Q8NG06 486 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 WFDC5Q8TCV5 224 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 FAF2Q96CS3 445 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 TMEM248Q9NWD8 314 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 TRMT1Q9NXH9 659 aaKnown RBP20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 MPP6Q9NZW5 540 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 NUP205Q92621 2012 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 TECTAO75443 2155 aa20.63■□□□□ 0.89
SCAMP3-201ENST00000302631 CCDC66A2RUB6 948 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 C3orf70A6NLC5 250 aaPredicted RBP20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 PI4K2BG5E9Z4 385 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 EEF2KO00418 725 aaKnown RBP20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 CREB3O43889 395 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 GOT1P17174 413 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 GALK1P51570 392 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 CDH6P55285 790 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 DPYSQ14117 519 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 DPYSL3Q14195 570 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 TAZQ16635 292 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 TMEM196Q5HYL7 178 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 NAIF1Q69YI7 327 aaPredicted RBP20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 CXorf57Q6NSI4 855 aaKnown RBP20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 PEX26Q7Z412 305 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 KATNAL2Q8IYT4 538 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 ZNF687Q8N1G0 1237 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 NAT16Q8N8M0 369 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 RAPGEF5Q92565 580 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 KRT35Q92764 455 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 BHMTQ93088 406 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 HES6Q96HZ4 224 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 SHDQ96IW2 340 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 PNKPQ96T60 521 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 STIM2Q9P246 746 aa20.62■□□□□ 0.89
SCAMP3-201ENST00000302631 CA14Q9ULX7 337 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms