RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 PYGBP11216 843 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 HOXA11P31270 313 aaPredicted RBP10.43□□□□□ -0.74
GABRB3-201ENST00000299267 LSP1P33241 339 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 PCK1P35558 622 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 CD86P42081 329 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 KPNA1P52294 538 aaPredicted RBP10.43□□□□□ -0.74
GABRB3-201ENST00000299267 CA9Q16790 459 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 ASTE1Q2TB18 679 aaPredicted RBP10.43□□□□□ -0.74
GABRB3-201ENST00000299267 SH2D4BQ5SQS7 431 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 C1orf220Q5T0J3 134 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 SZRD1Q7Z422 152 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 FUKQ8N0W3 1084 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 SPATA17Q96L03 361 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 NINJ2Q9NZG7 142 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 MSRAQ9UJ68 235 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 NRAPQ86VF7 1730 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 GOLGB1Q14789 3259 aaKnown RBP10.43□□□□□ -0.74
GABRB3-201ENST00000299267 FSCN2O14926 492 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 NCAM2O15394 837 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 RIPK2O43353 540 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 SHBGP04278 402 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 STX3Q13277 289 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 ART3Q13508 389 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 EML3Q32P44 896 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 TTC23LQ6PF05 361 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 LRRC37BQ96QE4 947 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 C11orf49Q9H6J7 331 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 GKN1Q9NS71 199 aa10.43□□□□□ -0.74
GABRB3-201ENST00000299267 RRP15Q9Y3B9 282 aaKnown RBP10.43□□□□□ -0.74
GABRB3-201ENST00000299267 MT-CO1P00395 513 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 CYBAP13498 195 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 CCNB1P14635 433 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 PBLDP30039 288 aaPredicted RBP10.42□□□□□ -0.74
GABRB3-201ENST00000299267 PPM1AP35813 382 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 MMP13P45452 471 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 IRAK1P51617 712 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 LRRC38Q5VT99 294 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 LRIG3Q6UXM1 1119 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 ARL14EPQ8N8R7 260 aaPredicted RBP10.42□□□□□ -0.74
GABRB3-201ENST00000299267 BORCS6Q96GS4 357 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 CSPG4P5Q96PW8 444 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 ETNK2Q9NVF9 386 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 IL1RAPL1Q9NZN1 696 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 UXTQ9UBK9 157 aaPredicted RBP10.42□□□□□ -0.74
GABRB3-201ENST00000299267 UBA2Q9UBT2 640 aaPredicted RBP10.42□□□□□ -0.74
GABRB3-201ENST00000299267 GNEQ9Y223 722 aaKnown RBP10.42□□□□□ -0.74
GABRB3-201ENST00000299267 CRYL1Q9Y2S2 319 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 OPHN1O60890 802 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 SERPIND1P05546 499 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 MPP3Q13368 585 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 CHI3L2Q15782 390 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 FAM187BQ17R55 369 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 TMC5Q6UXY8 1006 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 TAC4Q86UU9 113 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 SEMA3CQ99985 751 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 TCF25Q9BQ70 676 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 TSSK1BQ9BXA7 367 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 SENP1Q9P0U3 644 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 SLC25A13Q9UJS0 675 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 H0Y3Z8 333 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 SRP72O76094 671 aaKnown RBP10.42□□□□□ -0.74
GABRB3-201ENST00000299267 NR2C2P49116 596 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 ALDH18A1P54886 795 aaKnown RBP10.42□□□□□ -0.74
GABRB3-201ENST00000299267 KDSRQ06136 332 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 IMPG1Q17R60 797 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 TTC39BQ5VTQ0 682 aaPredicted RBP10.42□□□□□ -0.74
GABRB3-201ENST00000299267 SDE2Q6IQ49 451 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 LINGO4Q6UY18 593 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 CLEC20AQ6ZU45 233 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 CCDC149Q6ZUS6 474 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 ADCK2Q7Z695 626 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 LMO3Q8TAP4 145 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 P2RY11Q96G91 374 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 TMEM209Q96SK2 561 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 ADAMTS10Q9H324 1103 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 PCDHGC3Q9UN70 934 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 ADGRA2Q96PE1 1338 aa10.42□□□□□ -0.74
GABRB3-201ENST00000299267 MYH10P35580 1976 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 SUPT3HB4E1H0 165 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 PER2O15055 1255 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 SUPT3HO75486 399 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 LRIG2O94898 1065 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 PCDH8O95206 1070 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 RBBP7Q16576 425 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 KBTBD12Q3ZCT8 623 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 ZNF470Q6ECI4 717 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 SLC26A9Q7LBE3 791 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 DDX60Q8IY21 1712 aaKnown RBP10.41□□□□□ -0.74
GABRB3-201ENST00000299267 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
GABRB3-201ENST00000299267 RUBCNQ92622 972 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 FAM161BQ96MY7 647 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 BBS2Q9BXC9 721 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 ROPN1BQ9BZX4 212 aaPredicted RBP10.41□□□□□ -0.74
GABRB3-201ENST00000299267 ROPN1Q9HAT0 212 aaPredicted RBP10.41□□□□□ -0.74
GABRB3-201ENST00000299267 CD274Q9NZQ7 290 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 RAB21Q9UL25 225 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 EP400Q96L91 3159 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 LOC100653049A0A140TA62 436 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 C2CD4BA6NLJ0 364 aa10.41□□□□□ -0.74
GABRB3-201ENST00000299267 SMIM24O75264 130 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms