RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FAM72BQ86X60 149 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 CDKL2Q92772 493 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 RNF39Q9H2S5 420 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 DCXO43602 365 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 GRM5P41594 1212 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 CCR10P46092 362 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 AP2B1P63010 937 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 GRIK4Q16099 956 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 HFE2Q6ZVN8 426 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 MARK2Q7KZI7 788 aaKnown RBP25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 CENPIQ92674 756 aaPredicted RBP25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 OLFM3Q96PB7 478 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 UBP1Q9NZI7 540 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 GOLGA8QA0A0J9YX86 632 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 GOLGA8OA6NCC3 632 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 GOLGA8NF8WBI6 632 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 GLRA3O75311 464 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 RECQL4O94761 1208 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 NR2C2P49116 596 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 C9orf57Q5W0N0 161 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 MAMDC4Q6UXC1 1216 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 NAPRTQ6XQN6 538 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 PIGZQ86VD9 579 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 HPS6Q86YV9 775 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 ANKRD52Q8NB46 1076 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 VCXQ9H320 206 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 ATP9BO43861 1147 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 GSTA2P09210 222 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 RALBP11234 206 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 TPH1P17752 444 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 LBRQ14739 615 aaKnown RBP25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 LRRC8BQ6P9F7 803 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 TIFABQ6ZNK6 161 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 DCLK2Q8N568 766 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 RNF139Q8WU17 664 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 ZNF669Q96BR6 464 aaPredicted RBP25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 EBF3Q9H4W6 596 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 COPG2Q9UBF2 871 aa25.03■■□□□ 1.6
SPTSSA-201ENST00000298130 F8W8V4 182 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 ALDH1A2O94788 518 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 ZFXP17010 805 aaPredicted RBP25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 CDC16Q13042 620 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 EML3Q32P44 896 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 PDPK2PQ6A1A2 396 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 ZNF781Q8N8C0 355 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 RNF169Q8NCN4 708 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 GATA6Q92908 595 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 ATP2A3Q93084 1043 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 TUBGCP5Q96RT8 1024 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 SNX15Q9NRS6 342 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 FZD10Q9ULW2 581 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 A0A0G2JMZ2 1700 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 LRRC37A2A6NM11 1700 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 SERPINE1P05121 402 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 AOC1P19801 751 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 POLE2P56282 527 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 DEFB107AQ8IZN7 70 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 PPP4R1Q8TF05 950 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 ECSITQ9BQ95 431 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 UNKQ9C0B0 810 aaKnown RBP25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 MORF4L1Q9UBU8 362 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 PPP2R3BQ9Y5P8 575 aa25.02■■□□□ 1.6
SPTSSA-201ENST00000298130 ZNF638Q14966 1978 aaKnown RBP25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 M0QYT0 321 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 PGAM1P18669 254 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 COPAP53621 1224 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 CUL3Q13618 768 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 LAMC2Q13753 1193 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 ZRSR2Q15696 482 aaKnown RBP25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 STEAP4Q687X5 459 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 FRMD7Q6ZUT3 714 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 MFSD3Q96ES6 412 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 SNX27Q96L92 541 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 ANLNQ9NQW6 1124 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 KLHL8Q9P2G9 620 aaPredicted RBP25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 SNX10Q9Y5X0 201 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 MSX2P35548 267 aaPredicted RBP25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 BCAT1P54687 386 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 DSG1Q02413 1049 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 HSP90AA5PQ58FG0 334 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 OTUD1Q5VV17 481 aaPredicted RBP25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 IFNLR1Q8IU57 520 aaPredicted RBP25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 MAPK15Q8TD08 544 aa25.01■■□□□ 1.59
SPTSSA-201ENST00000298130 NEMP1O14524 444 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 IFRD2Q12894 506 aaPredicted RBP25■■□□□ 1.59
SPTSSA-201ENST00000298130 SLC9B1Q4ZJI4 515 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 EFHC1Q5JVL4 640 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 STRA8Q7Z7C7 330 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 DNAAF3Q8N9W5 541 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 DCPSQ96C86 337 aaKnown RBP25■■□□□ 1.59
SPTSSA-201ENST00000298130 OPTNQ96CV9 577 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 CERS2Q96G23 380 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 ZBTB14O43829 449 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 SETSIPP0DME0 302 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 SOX4Q06945 474 aaPredicted RBP25■■□□□ 1.59
SPTSSA-201ENST00000298130 ASPHQ12797 758 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 BEST2Q8NFU1 509 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 GCOM2Q9BZD3 368 aaPredicted RBP25■■□□□ 1.59
SPTSSA-201ENST00000298130 SNX25Q9H3E2 840 aa25■■□□□ 1.59
SPTSSA-201ENST00000298130 ADAMTS6Q9UKP5 1117 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms