RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HASPINQ8TF76 798 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 ACO2Q99798 780 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 KCTD14Q9BQ13 255 aaPredicted RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 AHSPQ9NZD4 102 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 UBP1Q9NZI7 540 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 STK39Q9UEW8 545 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 PTPN1P18031 435 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 SLC34A1Q06495 639 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 YTHDF3Q7Z739 585 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 CKAP2Q8WWK9 683 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 ART4Q93070 314 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 YME1L1Q96TA2 773 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 PHACTR1Q9C0D0 580 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 ATP13A1Q9HD20 1204 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 UTP6Q9NYH9 597 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 SAC3D1A6NKF1 404 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 DDNO94850 711 aaPredicted RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 TRUB2O95900 331 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 ACBD5Q5T8D3 534 aaPredicted RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 ZNF398Q8TD17 642 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 ACTR8Q9H981 624 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 COPS7BQ9H9Q2 264 aaPredicted RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 EXOSC4Q9NPD3 245 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 DDX28Q9NUL7 540 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 V9GYQ6 96 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 RECQL4O94761 1208 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 NUDT17P0C025 328 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 SOX11P35716 441 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 KRR1Q13601 381 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 PCID2Q5JVF3 399 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 FAM120BQ96EK7 910 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 SENP8Q96LD8 212 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 PRRG3Q9BZD7 231 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 ZCCHC2Q9C0B9 1178 aaKnown RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 PCDHA11Q9Y5I1 949 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 FASP25445 335 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 TM4SF1P30408 202 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 DDX39BQ13838 428 aaKnown RBP13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ERAP2Q6P179 960 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 TSEN2Q8NCE0 465 aaKnown RBP13.05□□□□□ -0.32
PTCD1-201ENST00000292478 STARD8Q92502 1023 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 TNFRSF25Q93038 417 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 MFSD14AQ96MC6 490 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 TKTL2Q9H0I9 626 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 CDH9Q9ULB4 789 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 TIMM13Q9Y5L4 95 aaPredicted RBP13.05□□□□□ -0.32
PTCD1-201ENST00000292478 H3BMM5 538 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 TPST1O60507 370 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 AMPD2Q01433 879 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 FMO1Q01740 532 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 NR6A1Q15406 480 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 SKIV2LQ15477 1246 aaKnown RBP13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ZBTB49Q6ZSB9 765 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 PANX3Q96QZ0 392 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ZNF670Q9BS34 389 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 YIPF2Q9BWQ6 316 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 XPNPEP3Q9NQH7 507 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 NDUFAF1Q9Y375 327 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ZNF711Q9Y462 761 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 IGSF6O95976 241 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 SPATA31C1P0DKV0 1188 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 FUT2Q10981 343 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ZACNQ401N2 412 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ZNF470Q6ECI4 717 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ACMSDQ8TDX5 336 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 KAT2BQ92831 832 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 CDCA5Q96FF9 252 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 DPY30Q9C005 99 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 WDR41Q9HAD4 459 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 TBKBP1A7MCY6 615 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 CCDC130P13994 396 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 KRT20P35900 424 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 PGS1Q32NB8 556 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 FAM98BQ52LJ0 330 aaKnown RBP13.05□□□□□ -0.32
PTCD1-201ENST00000292478 FAM171A1Q5VUB5 890 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 CERS5Q8N5B7 392 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 C4orf32Q8N8J7 132 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ZFYVE19Q96K21 471 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ULBP1Q9BZM6 244 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 POLR1EQ9GZS1 481 aaKnown RBP13.05□□□□□ -0.32
PTCD1-201ENST00000292478 SLC15A5A6NIM6 579 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 OR56A5P0C7T3 313 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 CYP2A6P11509 494 aaPredicted RBP13.05□□□□□ -0.32
PTCD1-201ENST00000292478 MSH3P20585 1137 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 ADCYAP1R1P41586 468 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 HALP42357 657 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 HK2P52789 917 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 INHBEP58166 350 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 VGLL4Q14135 290 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 SLC25A23Q9BV35 468 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 TAS2R14Q9NYV8 317 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 UBA2Q9UBT2 640 aaPredicted RBP13.05□□□□□ -0.32
PTCD1-201ENST00000292478 DERAQ9Y315 318 aa13.05□□□□□ -0.32
PTCD1-201ENST00000292478 FSBPO95073 299 aa13.04□□□□□ -0.32
PTCD1-201ENST00000292478 VAPBO95292 243 aa13.04□□□□□ -0.32
PTCD1-201ENST00000292478 CKBP12277 381 aa13.04□□□□□ -0.32
PTCD1-201ENST00000292478 ATP6V1B1P15313 513 aa13.04□□□□□ -0.32
PTCD1-201ENST00000292478 NPR3P17342 541 aa13.04□□□□□ -0.32
PTCD1-201ENST00000292478 TPH1P17752 444 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms