RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 BTBD8Q5XKL5 378 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 ULK2Q8IYT8 1036 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 PHF21BQ96EK2 531 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 LRRC40Q9H9A6 602 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 EBF2Q9HAK2 575 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 PTPRHQ9HD43 1115 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 CHRAC1Q9NRG0 131 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 DCDC2Q9UHG0 476 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 C2CD2Q9Y426 696 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 SMIM28A0A1B0GU29 152 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 FZD9O00144 591 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 TRDMT1O14717 391 aaKnown RBP16.29■□□□□ 0.2
SMAD6-201ENST00000288840 KLHL2O95198 593 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 BDNFP23560 247 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 KCNJ11Q14654 390 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 TNFAIP8L3Q5GJ75 292 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 PPP1R15BQ5SWA1 713 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 C9orf57Q5W0N0 161 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 TRIM67Q6ZTA4 783 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 TREML1Q86YW5 311 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 TKTL2Q9H0I9 626 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 USP29Q9HBJ7 922 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 GBA2Q9HCG7 927 aaPredicted RBP16.29■□□□□ 0.2
SMAD6-201ENST00000288840 PCDHA11Q9Y5I1 949 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 NFKB1P19838 968 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 TBL3Q12788 808 aaKnown RBP16.28■□□□□ 0.2
SMAD6-201ENST00000288840 MED21Q13503 144 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 KIF19Q2TAC6 998 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 LPCAT4Q643R3 524 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 HFE2Q6ZVN8 426 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 SNX31Q8N9S9 440 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 TDRD5Q8NAT2 981 aaKnown RBP16.28■□□□□ 0.2
SMAD6-201ENST00000288840 MAGEC3Q8TD91 643 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 CMTM5Q96DZ9 223 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 CERS2Q96G23 380 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 BCO2Q9BYV7 579 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 ZNF112Q9UJU3 913 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 CNTN6Q9UQ52 1028 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 SERPINE1P05121 402 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 GNAT1P11488 350 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 L1CAMP32004 1257 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 CCDC15Q0P6D6 951 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 KCNMB4Q86W47 210 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 IFNEQ86WN2 208 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 ATPAF2Q8N5M1 289 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 ANLNQ9NQW6 1124 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 ARHGEF4Q9NR80 690 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 HBS1LQ9Y450 684 aaKnown RBP16.28■□□□□ 0.2
SMAD6-201ENST00000288840 TPST1O60507 370 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 PTPN1P18031 435 aaKnown RBP16.28■□□□□ 0.2
SMAD6-201ENST00000288840 PRKD1Q15139 912 aaPredicted RBP16.28■□□□□ 0.2
SMAD6-201ENST00000288840 ITPRIPL1Q6GPH6 555 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 MIB1Q86YT6 1006 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 ZSCAN18Q8TBC5 510 aaPredicted RBP16.28■□□□□ 0.2
SMAD6-201ENST00000288840 RHOBTB2Q9BYZ6 727 aa16.28■□□□□ 0.2
SMAD6-201ENST00000288840 PRG3Q9Y2Y8 225 aaPredicted RBP16.28■□□□□ 0.2
SMAD6-201ENST00000288840 hCG_2014768A0A024R1R8 64 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 TREHO43280 583 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 EPHX2P34913 555 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 DBN1Q16643 649 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 CDCA2Q69YH5 1023 aaPredicted RBP16.27■□□□□ 0.2
SMAD6-201ENST00000288840 OLFML1Q6UWY5 402 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 ILKAPQ9H0C8 392 aaPredicted RBP16.27■□□□□ 0.2
SMAD6-201ENST00000288840 SNX15Q9NRS6 342 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 PRAMEP78395 509 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 CSHL1Q14406 222 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 ZNF460Q14592 562 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 OTOP3Q7RTS5 596 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 SNX32Q86XE0 403 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 MYLK4Q86YV6 388 aaPredicted RBP16.27■□□□□ 0.2
SMAD6-201ENST00000288840 HPS6Q86YV9 775 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 ICA1LQ8NDH6 482 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 SENP8Q96LD8 212 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 SYT15Q9BQS2 421 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 SPON2Q9BUD6 331 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 ABI2Q9NYB9 513 aaPredicted RBP16.27■□□□□ 0.2
SMAD6-201ENST00000288840 OR12D3Q9UGF7 316 aa16.27■□□□□ 0.2
SMAD6-201ENST00000288840 UBA6A0AVT1 1052 aaPredicted RBP16.27■□□□□ 0.19
SMAD6-201ENST00000288840 TSPAN3O60637 253 aa16.27■□□□□ 0.19
SMAD6-201ENST00000288840 DSG1Q02413 1049 aa16.27■□□□□ 0.19
SMAD6-201ENST00000288840 ARHGAP1Q07960 439 aa16.27■□□□□ 0.19
SMAD6-201ENST00000288840 SDHAF4Q5VUM1 108 aa16.27■□□□□ 0.19
SMAD6-201ENST00000288840 IYDQ6PHW0 289 aa16.27■□□□□ 0.19
SMAD6-201ENST00000288840 ASRGL1Q7L266 308 aa16.27■□□□□ 0.19
SMAD6-201ENST00000288840 SPATA22Q8NHS9 363 aa16.27■□□□□ 0.19
SMAD6-201ENST00000288840 GCNAQ96QF7 691 aa16.27■□□□□ 0.19
SMAD6-201ENST00000288840 WDR83Q9BRX9 315 aaKnown RBP16.27■□□□□ 0.19
SMAD6-201ENST00000288840 FICDQ9BVA6 458 aa16.27■□□□□ 0.19
SMAD6-201ENST00000288840 ZBTB24O43167 697 aaPredicted RBP16.26■□□□□ 0.19
SMAD6-201ENST00000288840 DLDP09622 509 aaKnown RBP16.26■□□□□ 0.19
SMAD6-201ENST00000288840 PGAM1P18669 254 aa16.26■□□□□ 0.19
SMAD6-201ENST00000288840 MATKP42679 507 aa16.26■□□□□ 0.19
SMAD6-201ENST00000288840 CNGA3Q16281 694 aa16.26■□□□□ 0.19
SMAD6-201ENST00000288840 TAF12Q16514 161 aa16.26■□□□□ 0.19
SMAD6-201ENST00000288840 ZNF567Q8N184 647 aa16.26■□□□□ 0.19
SMAD6-201ENST00000288840 PNPLA1Q8N8W4 532 aa16.26■□□□□ 0.19
SMAD6-201ENST00000288840 TRPV6Q9H1D0 765 aa16.26■□□□□ 0.19
SMAD6-201ENST00000288840 SARS2Q9NP81 518 aaKnown RBP16.26■□□□□ 0.19
SMAD6-201ENST00000288840 CDY2AQ9Y6F7 541 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms