RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CAPSLQ8WWF8 208 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 OTULINQ96BN8 352 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 WDCPQ9H6R7 721 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 SP110Q9HB58 689 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 ARL8BQ9NVJ2 186 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 WDR70Q9NW82 654 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 GOLGA4Q13439 2230 aaKnown RBP12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 LYPLA1O75608 230 aaPredicted RBP12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 NOVP48745 357 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 TKTL1P51854 596 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 ZNF143P52747 638 aaPredicted RBP12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 NME5P56597 212 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 SLC25A3Q00325 362 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 BNIP1Q12981 228 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 POU6F1Q14863 301 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 LACTB2Q53H82 288 aaPredicted RBP12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 SLC45A4Q5BKX6 768 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 PPP1R26Q5T8A7 1209 aaPredicted RBP12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 MARK2Q7KZI7 788 aaKnown RBP12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 SETD3Q86TU7 594 aaPredicted RBP12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 ZDHHC14Q8IZN3 488 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 FRMD8P1Q9BZ68 369 aaPredicted RBP12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 ILKAPQ9H0C8 392 aaPredicted RBP12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 DHX33Q9H6R0 707 aaKnown RBP12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 MAN1C1Q9NR34 630 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 CHD4Q14839 1912 aa12.83□□□□□ -0.35
SLC6A1-201ENST00000287766 ATP6V1G1O75348 118 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 MTA2O94776 668 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 PROCP04070 461 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 CETPP11597 493 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 ACADSBP45954 432 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 GALK1P51570 392 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 GRIK4Q16099 956 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 CYP1B1Q16678 543 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 TMEM245Q9H330 911 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 RRN3Q9NYV6 651 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 LSM1O15116 133 aaKnown RBP12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 LGALS2P05162 132 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 ABHD2P08910 425 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 SLC1A6P48664 564 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 WASHC5Q12768 1159 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 STX5Q13190 355 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 GTF2H3Q13889 308 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 MPP2Q14168 576 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 CELF3Q5SZQ8 465 aaKnown RBP12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 OTUD3Q5T2D3 398 aaPredicted RBP12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 C12orf50Q8NA57 414 aaPredicted RBP12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 FAM13CQ8NE31 585 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 IFT43Q96FT9 208 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 HERPUD2Q9BSE4 406 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 FRMD8Q9BZ67 464 aaPredicted RBP12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 ELOVL4Q9GZR5 314 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 ZNF212Q9UDV6 495 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 KIAA1257Q9ULG3 409 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 DOLKQ9UPQ8 538 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 ACTL7BQ9Y614 415 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 TCRBV7S3A2A0A539 114 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 RTP1P59025 263 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 GBE1Q04446 702 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 UBAP2LQ14157 1087 aaKnown RBP12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 PTK2BQ14289 1009 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 INAQ16352 499 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 NRF1Q16656 503 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 CCDC142Q17RM4 750 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 FUT11Q495W5 492 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 SV2CQ496J9 727 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 PERM1Q5SV97 790 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 TNS4Q8IZW8 715 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 THEM5Q8N1Q8 247 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 ATAD3AQ9NVI7 634 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 HMGXB4Q9UGU5 601 aa12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 RUVBL2Q9Y230 463 aaKnown RBP12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 ARIH1Q9Y4X5 557 aaPredicted RBP12.83□□□□□ -0.36
SLC6A1-201ENST00000287766 NFASCO94856 1347 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 CASTOR2A6NHX0 329 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 GPR25O00155 361 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 RECQL4O94761 1208 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 GOT1P17174 413 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 ARF4P18085 180 aaPredicted RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 PSMB4P28070 264 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 BST2Q10589 180 aaKnown RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 MAPRE1Q15691 268 aaKnown RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 RNASEH2BQ5TBB1 312 aaKnown RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 TRIM74Q86UV6 250 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 TRIM73Q86UV7 250 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 C1orf127Q8N9H9 656 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 JADE3Q92613 823 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 EGFL8Q99944 293 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 ASB7Q9H672 318 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 ARHGEF38Q9NXL2 777 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 ZNF214Q9UL59 606 aaPredicted RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 IRS2Q9Y4H2 1338 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 MARF1Q9Y4F3 1742 aaKnown RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 KLRG2A4D1S0 409 aaPredicted RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 RAB14P61106 215 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 OGDHQ02218 1023 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms