RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 NDRG1Q92597 394 aaKnown RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 DACT3Q96B18 629 aaPredicted RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 LRRC40Q9H9A6 602 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 IPO11Q9UI26 975 aaKnown RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 STX16-NPEPL1H3BU86 382 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 INPP4BO15327 924 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 CYP1A1P04798 512 aaPredicted RBP17.49■□□□□ 0.39
SRF-201ENST00000265354 NFKBIAP25963 317 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 PTPN7P35236 360 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TNFAIP2Q03169 654 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 STX5Q13190 355 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TBCELQ5QJ74 424 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 C1orf220Q5T0J3 134 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TMC5Q6UXY8 1006 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 KYAT3Q6YP21 454 aaKnown RBP17.49■□□□□ 0.39
SRF-201ENST00000265354 VSIG10LQ86VR7 867 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 FBXW8Q8N3Y1 598 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 PLEKHA5Q9HAU0 1116 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TMEM216Q9P0N5 145 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 RPL26L1Q9UNX3 145 aaKnown RBP17.49■□□□□ 0.39
SRF-201ENST00000265354 MYH11P35749 1972 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 C5P01031 1676 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TCEA3O75764 348 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 SORBS2O94875 1100 aaKnown RBP17.49■□□□□ 0.39
SRF-201ENST00000265354 MPSTP25325 297 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 FDFT1P37268 417 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TUFMP49411 452 aaKnown RBP17.49■□□□□ 0.39
SRF-201ENST00000265354 KIZQ2M2Z5 673 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TEDDM1Q5T9Z0 273 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TATDN1Q6P1N9 297 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 CCDC81Q6ZN84 652 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TDRPQ86YL5 185 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 SAMD3Q8N6K7 520 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 DCAKDQ8WVC6 231 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 GFM2Q969S9 779 aaKnown RBP17.49■□□□□ 0.39
SRF-201ENST00000265354 EGFL7Q9UHF1 273 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 HES2Q9Y543 173 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 MT-ND1P03886 318 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 GOT1P17174 413 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 ACO1P21399 889 aaKnown RBP17.49■□□□□ 0.39
SRF-201ENST00000265354 GRIA3P42263 894 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 TRPC1P48995 793 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 CSE1LP55060 971 aaKnown RBP17.49■□□□□ 0.39
SRF-201ENST00000265354 MAPK11Q15759 364 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 DRAXINQ8NBI3 349 aaPredicted RBP17.49■□□□□ 0.39
SRF-201ENST00000265354 EDEM1Q92611 657 aa17.49■□□□□ 0.39
SRF-201ENST00000265354 RNASEH1O60930 286 aaKnown RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 PAMP19021 973 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 KLF10Q13118 480 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 ZIK1Q3SY52 487 aaPredicted RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 C17orf50Q8WW18 174 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 DDX1Q92499 740 aaKnown RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.48■□□□□ 0.39
SRF-201ENST00000265354 IQCA1LA6NCM1 817 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 ABLIM1O14639 778 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 MAGEC1O60732 1142 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 TRAF2Q12933 501 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 CAPSQ13938 189 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 INPP5AQ14642 412 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 KRT72Q14CN4 511 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 PRKD1Q15139 912 aaPredicted RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 C12orf56Q8IXR9 622 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 ZC3H3Q8IXZ2 948 aaKnown RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 SH3GL1Q99961 368 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 BEGAINQ9BUH8 593 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 TIMM13Q9Y5L4 95 aaPredicted RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 RBM47A0AV96 593 aaKnown RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 VWA5AO00534 786 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 TRDMT1O14717 391 aaKnown RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 CHADO15335 359 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 BNIP3LO60238 219 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 BAIAP3O94812 1187 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 DLDP09622 509 aaKnown RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 NR4A1P22736 598 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 TAF12Q16514 161 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 PAN2Q504Q3 1202 aaKnown RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 MTX3Q5HYI7 312 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 NRG4Q8WWG1 115 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 FIZ1Q96SL8 496 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 UBE2OQ9C0C9 1292 aaKnown RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 FAM149AA5PLN7 773 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 ADCY6O43306 1168 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 GNAZP19086 355 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 BAG6P46379 1132 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 PGGT1BP53609 377 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 PHTF2Q8N3S3 785 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 PLD5Q8N7P1 536 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 ZNF781Q8N8C0 355 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 XPNPEP1Q9NQW7 623 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 PIN4Q9Y237 131 aaKnown RBP17.48■□□□□ 0.39
SRF-201ENST00000265354 MYRFQ9Y2G1 1151 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 AP4S1Q9Y587 144 aa17.48■□□□□ 0.39
SRF-201ENST00000265354 UBDO15205 165 aa17.47■□□□□ 0.39
SRF-201ENST00000265354 VNN1O95497 513 aa17.47■□□□□ 0.39
SRF-201ENST00000265354 WASHC5Q12768 1159 aa17.47■□□□□ 0.39
SRF-201ENST00000265354 MAPRE2Q15555 327 aa17.47■□□□□ 0.39
SRF-201ENST00000265354 ANGEL2Q5VTE6 544 aaKnown RBP17.47■□□□□ 0.39
SRF-201ENST00000265354 PCYOX1LQ8NBM8 494 aa17.47■□□□□ 0.39
SRF-201ENST00000265354 RNF139Q8WU17 664 aa17.47■□□□□ 0.39
SRF-201ENST00000265354 EMID1Q96A84 441 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms