RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SYTL5Q8TDW5 730 aaPredicted RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 ZNF606Q8WXB4 792 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 ACSF2Q96CM8 615 aaPredicted RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 HGH1Q9BTY7 390 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 PALMDQ9NP74 551 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 PNPLA8Q9NP80 782 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 PDLIM7Q9NR12 457 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 HOMER2Q9NSB8 354 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 DNAJC28Q9NX36 388 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 AGO2Q9UKV8 859 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 PRSS51A0A1B0GVH4 220 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 C7orf72A4D263 438 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 TMEM150BA6NC51 233 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 DCXO43602 365 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 ATE1O95260 518 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 CCNE2O96020 404 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 PABPC1P11940 636 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 ZNF26P17031 533 aaPredicted RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 CDH5P33151 784 aaPredicted RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 CA8P35219 290 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 RPL7AP62424 266 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 BASP1P80723 227 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 ZNF252P-AS1Q0IIN9 211 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 ZBTB17Q13105 803 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 BMPR2Q13873 1038 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 PPP2R5DQ14738 602 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 TAZQ16635 292 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 FASTKD1Q53R41 847 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 CARM1Q86X55 608 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 NDUFAF2Q8N183 169 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 UBR7Q8N806 425 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 BHLHE22Q8NFJ8 381 aaPredicted RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 FNIP1Q8TF40 1166 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 GPRASP2Q96D09 838 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 CFAP36Q96G28 342 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 NSMCE3Q96MG7 304 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 MCEEQ96PE7 176 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 TMEM79Q9BSE2 394 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 FAM96AQ9H5X1 160 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 DHX33Q9H6R0 707 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 CLK4Q9HAZ1 481 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 APOBEC3GQ9HC16 384 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 OLAHQ9NV23 265 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 ATAD3AQ9NVI7 634 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 RNF181Q9P0P0 153 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 SAE1Q9UBE0 346 aaPredicted RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 ZNF112Q9UJU3 913 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 CDC14AQ9UNH5 594 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 SLC8A2Q9UPR5 921 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 NFIBO00712 420 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 GIPC1O14908 333 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 NAT1P18440 290 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 XRCC1P18887 633 aaPredicted RBP13.44□□□□□ -0.26
NUP54-201ENST00000264883 CRHR1P34998 444 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 DYNLT1P63172 113 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 NR1D2Q14995 579 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 TEDDM1Q5T9Z0 273 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 SPOPLQ6IQ16 392 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 TMEM102Q8N9M5 508 aaPredicted RBP13.44□□□□□ -0.26
NUP54-201ENST00000264883 ATP2A3Q93084 1043 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 ARPC5LQ9BPX5 153 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 SH2D3AQ9BRG2 576 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 OSBPL11Q9BXB4 747 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 NCKIPSDQ9NZQ3 722 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 TEX264Q9Y6I9 313 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 DOCK1Q14185 1865 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 C3orf70A6NLC5 250 aaPredicted RBP13.44□□□□□ -0.26
NUP54-201ENST00000264883 H0YJX3 145 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 NOP56O00567 594 aaKnown RBP13.44□□□□□ -0.26
NUP54-201ENST00000264883 AIM2O14862 343 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 KRT38O76015 456 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 DDNO94850 711 aaPredicted RBP13.44□□□□□ -0.26
NUP54-201ENST00000264883 CFHP08603 1231 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 POLR2BP30876 1174 aaKnown RBP13.44□□□□□ -0.26
NUP54-201ENST00000264883 NUDT2P50583 147 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 THOP1P52888 689 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 OTUD4Q01804 1114 aaKnown RBP13.44□□□□□ -0.26
NUP54-201ENST00000264883 MOGQ16653 247 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 CYP2A13Q16696 494 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 MGAT5BQ3V5L5 792 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 FSCBQ5H9T9 825 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 VWA5B1Q5TIE3 1220 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 C16orf46Q6P387 395 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 ACTL9Q8TC94 416 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 DLG3Q92796 817 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 ANKRD36BP1Q96IX9 119 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 ZNF597Q96LX8 424 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 NDEL1Q9GZM8 345 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 PNPOQ9NVS9 261 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 RBAKQ9NYW8 714 aaPredicted RBP13.44□□□□□ -0.26
NUP54-201ENST00000264883 GGA3Q9NZ52 723 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 PCDHGC3Q9UN70 934 aa13.44□□□□□ -0.26
NUP54-201ENST00000264883 RBMX2Q9Y388 322 aaKnown RBP13.44□□□□□ -0.26
NUP54-201ENST00000264883 SSC5DA1L4H1 1573 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 CXorf49A8MYA2 514 aaPredicted RBP13.43□□□□□ -0.26
NUP54-201ENST00000264883 F8VP50 259 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 AQP9O43315 295 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 PSAPP07602 524 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 MSX2P35548 267 aaPredicted RBP13.43□□□□□ -0.26
NUP54-201ENST00000264883 KLF10Q13118 480 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms