RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 A0A0A0MRY4 1105 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 USP46P62068 366 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 DSC1Q08554 894 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 WASHC5Q12768 1159 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 BMPR2Q13873 1038 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 PID1Q7Z2X4 250 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 SCD5Q86SK9 330 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 TMEM173Q86WV6 379 aaPredicted RBP13.96□□□□□ -0.17
VMP1-201ENST00000262291 ABI1Q8IZP0 508 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 PXYLP1Q8TE99 480 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 CASP10Q92851 521 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 SPATA13Q96N96 652 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 DEFB118Q96PH6 123 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 SMC6Q96SB8 1091 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 APOL2Q9BQE5 337 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 PPP1R12CQ9BZL4 782 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 TTLL3Q9Y4R7 772 aa13.96□□□□□ -0.17
VMP1-201ENST00000262291 WDR27A2RRH5 827 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 C5orf60A6NFR6 353 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 FAM47DPA6NHR8 397 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 ENPP3O14638 875 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 DIAPH2O60879 1101 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.18
VMP1-201ENST00000262291 GKAP1Q5VSY0 366 aaPredicted RBP13.96□□□□□ -0.18
VMP1-201ENST00000262291 BTBD8Q5XKL5 378 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 PPP1R21Q6ZMI0 780 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 ARHGAP36Q6ZRI8 547 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 DEFB128Q7Z7B8 93 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 VSIG1Q86XK7 387 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 UROC1Q96N76 676 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 TGS1Q96RS0 853 aaKnown RBP13.96□□□□□ -0.18
VMP1-201ENST00000262291 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.96□□□□□ -0.18
VMP1-201ENST00000262291 C15orf41Q9Y2V0 281 aa13.96□□□□□ -0.18
VMP1-201ENST00000262291 ZNF487B1APH4 448 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 NDC80O14777 642 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 SNUPNO95149 360 aaKnown RBP13.95□□□□□ -0.18
VMP1-201ENST00000262291 SELPP16109 830 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 PRKD1Q15139 912 aaPredicted RBP13.95□□□□□ -0.18
VMP1-201ENST00000262291 PM20D1Q6GTS8 502 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 UNC5AQ6ZN44 842 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 KLHL8Q9P2G9 620 aaPredicted RBP13.95□□□□□ -0.18
VMP1-201ENST00000262291 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.95□□□□□ -0.18
VMP1-201ENST00000262291 CCDC78A2IDD5 438 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 ANKRD33BA6NCL7 494 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 FKTNO75072 461 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 TBX18O95935 607 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 EOMESO95936 686 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 ATP2A2P16615 1042 aaKnown RBP13.95□□□□□ -0.18
VMP1-201ENST00000262291 MGAT1P26572 445 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 CXCR3P49682 368 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 PDK1Q15118 436 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 ARL13BQ3SXY8 428 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 CTXN3Q4LDR2 81 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 TAS1R1Q7RTX1 841 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 AGAP11Q8TF27 550 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 CCT6BQ92526 530 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 SERAC1Q96JX3 654 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 CYTH2Q99418 400 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 SLC17A7Q9P2U7 560 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 SLC24A2Q9UI40 661 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 GGA2Q9UJY4 613 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 PCDHB7Q9Y5E2 793 aa13.95□□□□□ -0.18
VMP1-201ENST00000262291 DFFAO00273 331 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 APLP1P51693 650 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 FAM189BP81408 668 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 SEMA3BQ13214 749 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 RBBP5Q15291 538 aaKnown RBP13.94□□□□□ -0.18
VMP1-201ENST00000262291 KLHL38Q2WGJ6 581 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 FAM133BQ5BKY9 247 aaKnown RBP13.94□□□□□ -0.18
VMP1-201ENST00000262291 RSPO2Q6UXX9 243 aaPredicted RBP13.94□□□□□ -0.18
VMP1-201ENST00000262291 TDRPQ86YL5 185 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 SLC43A3Q8NBI5 491 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 CKAP2Q8WWK9 683 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 SIGLEC10Q96LC7 697 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 IKBKGQ9Y6K9 419 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 LAMA3Q16787 3333 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 HMBSP08397 361 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 INHBAP08476 426 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 DNAJC3Q13217 504 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 PAFAH1B3Q15102 231 aaKnown RBP13.94□□□□□ -0.18
VMP1-201ENST00000262291 ADGRD1Q6QNK2 874 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 TMCO2Q7Z6W1 182 aaPredicted RBP13.94□□□□□ -0.18
VMP1-201ENST00000262291 RIBC1Q8N443 379 aaPredicted RBP13.94□□□□□ -0.18
VMP1-201ENST00000262291 SLAIN1Q8ND83 568 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 TSEN34Q9BSV6 310 aaKnown RBP13.94□□□□□ -0.18
VMP1-201ENST00000262291 EBF2Q9HAK2 575 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 SLCO1B3Q9NPD5 702 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 NDFIP2Q9NV92 336 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 MPP6Q9NZW5 540 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 RCOR3Q9P2K3 495 aaPredicted RBP13.94□□□□□ -0.18
VMP1-201ENST00000262291 FRMPD3Q5JV73 1810 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 NLRC5Q86WI3 1866 aa13.94□□□□□ -0.18
VMP1-201ENST00000262291 SCN5AQ14524 2016 aa13.93□□□□□ -0.18
VMP1-201ENST00000262291 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
VMP1-201ENST00000262291 SMNDC1O75940 238 aaKnown RBP eCLIP13.93□□□□□ -0.18
VMP1-201ENST00000262291 CSH1P0DML2 217 aa13.93□□□□□ -0.18
VMP1-201ENST00000262291 CSH2P0DML3 217 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms