RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ACLYP53396 1101 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 CCDC6Q16204 474 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 LRRC73Q5JTD7 316 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 EFHC1Q5JVL4 640 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 LINGO4Q6UY18 593 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 PTAR1Q7Z6K3 402 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 RNF180Q86T96 592 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ALYREFQ86V81 257 aaKnown RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 PGM2Q96G03 612 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 COLEC11Q9BWP8 271 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 FTHL17Q9BXU8 183 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 GPR62Q9BZJ7 368 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 SLC40A1Q9NP59 571 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 CNTN6Q9UQ52 1028 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 USP15Q9Y4E8 981 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 SLC12A8A0AV02 714 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 H3BRJ5 948 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 SEPT4O43236 478 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 GCAP28676 217 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 FOXD4Q12950 439 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-201ENST00000258607 ZBTB17Q13105 803 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 SETDB1Q15047 1291 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 OTOP2Q7RTS6 562 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 C14orf80Q86SX3 495 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 NUDCD3Q8IVD9 361 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 CD302Q8IX05 232 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 NAT8LQ8N9F0 302 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 STAMBPL1Q96FJ0 436 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 FCRL2Q96LA5 508 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-201ENST00000258607 SRPK1Q96SB4 655 aaKnown RBP9.34□□□□□ -0.91
CKAP2-201ENST00000258607 CNOT10Q9H9A5 744 aaKnown RBP9.34□□□□□ -0.91
CKAP2-201ENST00000258607 USP29Q9HBJ7 922 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 CHST12Q9NRB3 414 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 GMIPQ9P107 970 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 ANK1P16157 1881 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 CCT8L1PA6NM43 557 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 CNTN5O94779 1100 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 HDCP19113 662 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 TGM2P21980 687 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 SERPINB3P29508 390 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 ADRA1BP35368 520 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 MAGEA9P43362 315 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 EPHB1P54762 984 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 DRG2P55039 364 aaKnown RBP9.34□□□□□ -0.91
CKAP2-201ENST00000258607 NME5P56597 212 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 ZNF697Q5TEC3 545 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 TAF2Q6P1X5 1199 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 NAPRTQ6XQN6 538 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 TAS1R1Q7RTX1 841 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 DENND6AQ8IWF6 608 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 BLOC1S5Q8TDH9 187 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 DQX1Q8TE96 717 aaKnown RBP9.34□□□□□ -0.91
CKAP2-201ENST00000258607 FICDQ9BVA6 458 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 PAK5Q9P286 719 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 CRYL1Q9Y2S2 319 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 CDY1Q9Y6F8 540 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 SBF1O95248 1867 aa9.34□□□□□ -0.91
CKAP2-201ENST00000258607 C9JVG2 144 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 PAGE1O75459 146 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 TAC1P20366 129 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 IRF9Q00978 393 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 INCA1Q0VD86 236 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 TAF1BQ53T94 588 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 TMEM110Q86TL2 294 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CAND1Q86VP6 1230 aaKnown RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 LINC01465Q8N7H1 131 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 C12orf50Q8NA57 414 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 FBXO32Q969P5 355 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 SLC4A5Q9BY07 1137 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 OXCT2Q9BYC2 517 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 MYLK2Q9H1R3 596 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CCSER2Q9H7U1 834 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 TLR9Q9NR96 1032 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 RBM22Q9NW64 420 aaKnown RBP eCLIP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 MTMR10Q9NXD2 777 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CNTN3Q9P232 1028 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 HEY2Q9UBP5 337 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 SLC2A6Q9UGQ3 507 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 REV3LO60673 3130 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 ASCC3Q8N3C0 2202 aaKnown RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 NCF1BA6NI72 391 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 NCF1CA8MVU1 366 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 TPP1O14773 563 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 GPR39O43194 453 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CA12O43570 354 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 SNX3O60493 162 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 MYL2P10916 166 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 ODC1P11926 461 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 BMP1P13497 986 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 NCF1P14598 390 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 KCNQ1P51787 676 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 SREBF2Q12772 1141 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 USP4Q13107 963 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 SLC45A4Q5BKX6 768 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 OTOAQ7RTW8 1153 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 STRA8Q7Z7C7 330 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CHSY1Q86X52 802 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 ECHDC2Q86YB7 292 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 ZNF75CPQ92670 426 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 NKD2Q969F2 451 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms