RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 GSTK1Q9Y2Q3 226 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 SH3GLB1Q9Y371 365 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 CYP27B1O15528 508 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 SERPINB1P30740 379 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 DSG3P32926 999 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 COX10Q12887 443 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 C4orf19Q8IY42 314 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
MED28-201ENST00000237380 OR56A4Q8NGH8 313 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 MAGED4Q96JG8 741 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 TRABDQ9H4I3 376 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 ACTR8Q9H981 624 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 DDX43Q9NXZ2 648 aaKnown RBP7.58□□□□□ -1.2
MED28-201ENST00000237380 UBP1Q9NZI7 540 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 C1orf167Q5SNV9 1468 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 CEMIPQ8WUJ3 1361 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 GSAPA4D1B5 854 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 GTPBP1O00178 669 aaKnown RBP7.58□□□□□ -1.2
MED28-201ENST00000237380 IFNA16P05015 189 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 NR2C1P13056 603 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 PSMD7P51665 324 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 DPCR1Q3MIW9 517 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 TIMM50Q3ZCQ8 353 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 RGMBQ6NW40 437 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 SLC30A9Q6PML9 568 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 FAM20CQ8IXL6 584 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 ZNF513Q8N8E2 541 aaPredicted RBP7.58□□□□□ -1.2
MED28-201ENST00000237380 MYH11P35749 1972 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 SOWAHDA6NJG2 315 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 UBXN7O94888 489 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 RCVRNP35243 200 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 PGM1P36871 562 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 SKIV2L2P42285 1042 aaKnown RBP7.58□□□□□ -1.2
MED28-201ENST00000237380 SETD9Q8NE22 299 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 ACTRT2Q8TDY3 377 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 REEP2Q9BRK0 252 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 OSBPL8Q9BZF1 889 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 FRMPD4Q14CM0 1322 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 TLX3O43711 291 aaPredicted RBP7.58□□□□□ -1.2
MED28-201ENST00000237380 ERCC1P07992 297 aaPredicted RBP7.58□□□□□ -1.2
MED28-201ENST00000237380 BTNL9Q6UXG8 535 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 TAS1R3Q7RTX0 852 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 ZNF34Q8IZ26 560 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 CPNE2Q96FN4 548 aaPredicted RBP7.58□□□□□ -1.2
MED28-201ENST00000237380 ELAC2Q9BQ52 826 aaKnown RBP7.58□□□□□ -1.2
MED28-201ENST00000237380 SAMSN1Q9NSI8 373 aaKnown RBP7.58□□□□□ -1.2
MED28-201ENST00000237380 SNX24Q9Y343 169 aa7.58□□□□□ -1.2
MED28-201ENST00000237380 ATP1A3P13637 1013 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 KLRC1P26715 233 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 TERF2Q15554 542 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 SERPINA13PQ6UXR4 307 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 WDR60Q8WVS4 1066 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 PPP1R10Q96QC0 940 aaKnown RBP7.57□□□□□ -1.2
MED28-201ENST00000237380 RBM15Q96T37 977 aaKnown RBP eCLIP7.57□□□□□ -1.22e-6■■■■■ 33.2
MED28-201ENST00000237380 BDH2Q9BUT1 245 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 UBE2Q2LH0YL09 131 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 AIF1P55008 147 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 AP1S2P56377 157 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 RESTQ13127 1097 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 NDUFA5Q16718 116 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 ERMARDQ5T6L9 678 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 FAM92BQ6ZTR7 304 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 ZNF589Q86UQ0 364 aaPredicted RBP7.57□□□□□ -1.2
MED28-201ENST00000237380 MTERF3Q96E29 417 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 BCL2L14Q9BZR8 327 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 MIR1-1HGQ9H1L0 117 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 DDX28Q9NUL7 540 aaKnown RBP7.57□□□□□ -1.2
MED28-201ENST00000237380 CCDC195A0A1B0GUA6 201 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 TEX33O43247 280 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 TBL3Q12788 808 aaKnown RBP7.57□□□□□ -1.2
MED28-201ENST00000237380 NR1D2Q14995 579 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 MAPK11Q15759 364 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 TCEAL6Q6IPX3 200 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 FIP1L1Q6UN15 594 aaKnown RBP7.57□□□□□ -1.2
MED28-201ENST00000237380 CCDC54Q8NEL0 328 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 ERVW-1Q9UQF0 538 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 NEDD4P46934 1319 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 TRIM24O15164 1050 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 PMPCBO75439 489 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 CAPN15O75808 1086 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 DDX6P26196 483 aaKnown RBP eCLIP7.57□□□□□ -1.21e-6■□□□□ 9.2
MED28-201ENST00000237380 PBLDP30039 288 aaPredicted RBP7.57□□□□□ -1.2
MED28-201ENST00000237380 PTPN9P43378 593 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 GFPT1Q06210 699 aaPredicted RBP7.57□□□□□ -1.2
MED28-201ENST00000237380 CDH17Q12864 832 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 MPPE1Q53F39 396 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 TCAIMQ8N3R3 496 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 SLC35G2Q8TBE7 412 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 ZNF507Q8TCN5 953 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 CYGBQ8WWM9 190 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 TLE6Q9H808 572 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 GLS2Q9UI32 602 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 SNX8Q9Y5X2 465 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 SNCAIPQ9Y6H5 919 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 BCLAF3A2AJT9 711 aaKnown RBP7.57□□□□□ -1.2
MED28-201ENST00000237380 GLUD1P00367 558 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 MAGEA9P43362 315 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 BOP1Q14137 746 aaKnown RBP7.57□□□□□ -1.2
MED28-201ENST00000237380 PGS1Q32NB8 556 aa7.57□□□□□ -1.2
MED28-201ENST00000237380 MIIPQ5JXC2 388 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms