RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 KLF10Q13118 480 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 HLFQ16534 295 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 CYP2A13Q16696 494 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 FAM98BQ52LJ0 330 aaKnown RBP13.15□□□□□ -0.3
VAMP4-201ENST00000236192 DSELQ8IZU8 1212 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 EXT2Q93063 718 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 ADI1Q9BV57 179 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 KMT5AQ9NQR1 393 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 AGLP35573 1532 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 CLRN2A0PK11 232 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 PRKCBP05771 671 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 HK2P52789 917 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 PRKD1Q15139 912 aaPredicted RBP13.15□□□□□ -0.3
VAMP4-201ENST00000236192 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 NECAB2Q7Z6G3 386 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 PGAM4Q8N0Y7 254 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 MCEEQ96PE7 176 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 MECRQ9BV79 373 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 ANAPC2Q9UJX6 822 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 DNPEPQ9ULA0 475 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 NR2E1Q9Y466 385 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 PCDHB2Q9Y5E7 798 aa13.15□□□□□ -0.3
VAMP4-201ENST00000236192 CAMSAP1Q5T5Y3 1602 aa13.15□□□□□ -0.31
VAMP4-201ENST00000236192 EFCAB10A6NFE3 127 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 C12orf71A8MTZ7 269 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 TRIM13O60858 407 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 POLBP06746 335 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 STAT3P40763 770 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 ACTR2P61160 394 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 PRKCQQ04759 706 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 LRTOMTQ8WZ04 291 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 PIK3R3Q92569 461 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 ZNF512BQ96KM6 892 aaPredicted RBP13.14□□□□□ -0.31
VAMP4-201ENST00000236192 FAM20AQ96MK3 541 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 SEPHS2Q99611 448 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 DHX35Q9H5Z1 703 aaKnown RBP13.14□□□□□ -0.31
VAMP4-201ENST00000236192 PLA2G4CQ9UP65 541 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 PREX2Q70Z35 1606 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 ZNF701M0R085 212 aaPredicted RBP13.14□□□□□ -0.31
VAMP4-201ENST00000236192 AXIN1O15169 862 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 AKAP3O75969 853 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 GYG1P46976 350 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 CAPRIN1Q14444 709 aaKnown RBP13.14□□□□□ -0.31
VAMP4-201ENST00000236192 ZDHHC13Q8IUH4 622 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 ATP6V1E2Q96A05 226 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 GBA3Q9H227 469 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 RSAD1Q9HA92 442 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 USP6P35125 1406 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 TESPA1A2RU30 521 aaPredicted RBP13.14□□□□□ -0.31
VAMP4-201ENST00000236192 LOC110117498-PIK3R3F6TDL0 507 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 ZBTB5O15062 677 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 BPGMP07738 259 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 TMBIM6P55061 237 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 PSMC6P62333 389 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 AP3B2Q13367 1082 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 USP10Q14694 798 aaKnown RBP13.14□□□□□ -0.31
VAMP4-201ENST00000236192 OR6B2Q6IFH4 312 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 FBXO11Q86XK2 927 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 THNSL1Q8IYQ7 743 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 ATL1Q8WXF7 558 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 CEP170P1Q96L14 293 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 HGH1Q9BTY7 390 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 ANKRD34BA5PLL1 514 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 VILLO15195 856 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 AVILO75366 819 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 GLRA2P23416 452 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 CLIP4Q8N3C7 705 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 TBATAQ96M53 351 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 TMEM246Q9BRR3 403 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 GINS4Q9BRT9 223 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 MLPHQ9BV36 600 aaPredicted RBP13.14□□□□□ -0.31
VAMP4-201ENST00000236192 BCS1LQ9Y276 419 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 B3GNT3Q9Y2A9 372 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 PLLPQ9Y342 182 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 SF3B1O75533 1304 aaKnown RBP eCLIP13.14□□□□□ -0.311e-7■■■■■ 182.4
VAMP4-201ENST00000236192 COL15A1P39059 1388 aa13.14□□□□□ -0.31
VAMP4-201ENST00000236192 B8ZZF3 427 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 I3L521 148 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 SLC22A1O15245 554 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 TIPRLO75663 272 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 CYP11B1P15538 503 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 TGM2P21980 687 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 CA9Q16790 459 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 CDO1Q16878 200 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 FUT11Q495W5 492 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 PTAR1Q7Z6K3 402 aaPredicted RBP13.13□□□□□ -0.31
VAMP4-201ENST00000236192 SLC15A3Q8IY34 581 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 RYBPQ8N488 228 aaPredicted RBP13.13□□□□□ -0.31
VAMP4-201ENST00000236192 BANPQ8N9N5 519 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 CENPOQ9BU64 300 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 POLIQ9UNA4 740 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 TOR1BO14657 336 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 TFECO14948 347 aaPredicted RBP13.13□□□□□ -0.31
VAMP4-201ENST00000236192 ALDH1B1P30837 517 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 CASP4P49662 377 aa13.13□□□□□ -0.31
VAMP4-201ENST00000236192 RPL14P50914 215 aaKnown RBP13.13□□□□□ -0.31
VAMP4-201ENST00000236192 GJA9P57773 515 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms